Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_D02
(852 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 175 2e-42
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 147 3e-34
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 136 9e-31
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 126 5e-28
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 117 3e-25
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 114 3e-24
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 109 7e-23
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 105 1e-21
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 97 5e-19
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 91 4e-17
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 78 3e-13
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 74 5e-12
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 73 9e-12
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 71 4e-11
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 69 1e-10
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 69 1e-10
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 69 2e-10
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 65 2e-09
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 63 7e-09
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 59 1e-07
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 55 3e-06
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 54 3e-06
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 52 2e-05
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 52 2e-05
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 51 3e-05
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 49 1e-04
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 45 0.003
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 42 0.015
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.020
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 0.74
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 34 4.0
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 34 5.2
UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage ... 33 6.9
UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61; Bacter... 33 6.9
UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;... 33 9.1
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 33 9.1
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 175 bits (425), Expect = 2e-42
Identities = 80/105 (76%), Positives = 95/105 (90%)
Frame = +1
Query: 190 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 370 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 504
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 93 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 194
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 147 bits (357), Expect = 3e-34
Identities = 70/105 (66%), Positives = 89/105 (84%)
Frame = +1
Query: 190 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
P SKELRQK+NV+SMP +KDDEVQVVRGHY+GQQ+GKV+QVYRKK+V+YI++++REKANG
Sbjct: 33 PLSKELRQKYNVQSMPTQKDDEVQVVRGHYEGQQIGKVVQVYRKKYVIYIKQVEREKANG 92
Query: 370 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 504
T VGIHPSK VI +LK+ +DRK IL+R+ +GK+KGKY
Sbjct: 93 TTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +3
Query: 93 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 194
MKFN VTS R K HF+APSHI R +MSSPL
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPL 34
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 136 bits (328), Expect = 9e-31
Identities = 66/102 (64%), Positives = 82/102 (80%), Gaps = 2/102 (1%)
Frame = +1
Query: 205 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATA 378
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 379 YVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 504
+VGIHPSK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 126 bits (305), Expect = 5e-28
Identities = 60/90 (66%), Positives = 76/90 (84%)
Frame = +1
Query: 235 PIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIV 414
P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T VGIHPSK V+
Sbjct: 58 PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVT 116
Query: 415 KLKMNKDRKAILDRRAKGRLAALGKDKGKY 504
KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 117 KLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 117 bits (282), Expect = 3e-25
Identities = 57/100 (57%), Positives = 74/100 (74%)
Frame = +1
Query: 190 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
P S ELR K+NV+SMPIRKDDEV VVRG KG++ GKV VYR K+ +++ERI R+K+NG
Sbjct: 34 PLSSELRAKYNVRSMPIRKDDEVMVVRGSNKGRE-GKVTSVYRLKWAIHVERISRDKSNG 92
Query: 370 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 489
+ + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 93 QSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
Score = 41.9 bits (94), Expect = 0.020
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 102 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 194
N + SSRRK+R HF+APS RRV++S+PL
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPL 35
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 114 bits (274), Expect = 3e-24
Identities = 48/89 (53%), Positives = 72/89 (80%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
SKELR K+ +++P+RKDDEV + RGH G++ GKV+++ RK+F +Y+ER+ REKANG +
Sbjct: 64 SKELRLKYKTRALPVRKDDEVLICRGHNHGRE-GKVVKINRKRFKIYVERVTREKANGES 122
Query: 376 AYVGIHPSKCVIVKLKMNKDRKAILDRRA 462
++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 123 TFIGIHPSNVILTKLKIDKNRKKILDRKA 151
Score = 56.0 bits (129), Expect = 1e-06
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = +3
Query: 57 VLSRVVLAKSDRMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 194
+L++++ + +MKFNKQ++S+RRK RK HF+AP+ +RR +MSS L
Sbjct: 18 LLTQIIFSPFSKMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKL 63
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 109 bits (263), Expect = 7e-23
Identities = 50/95 (52%), Positives = 72/95 (75%)
Frame = +1
Query: 190 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
P SKELR ++ +K++PIR+DDEV VVRG KGQ+ GK+ VYR KF V ++++ +EK NG
Sbjct: 34 PLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE-GKISSVYRLKFAVQVDKVTKEKVNG 92
Query: 370 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 474
A+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 93 ASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 96 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 194
K + V+S RRK RK +F+APS RRVL+S+PL
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPL 35
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 105 bits (252), Expect = 1e-21
Identities = 48/98 (48%), Positives = 72/98 (73%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
SK+LR+K+NV+++P+RKDDEV VVRG +KG + GKV VYRK++ + IE++ R KANG
Sbjct: 35 SKDLRKKYNVRALPVRKDDEVTVVRGTHKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMP 93
Query: 376 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 489
+ I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 94 YQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
Score = 33.9 bits (74), Expect = 5.2
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 93 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 194
MK + +V+S RRK R+ APS++R LMS+ L
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHL 34
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 97.1 bits (231), Expect = 5e-19
Identities = 46/92 (50%), Positives = 66/92 (71%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
SKELR+K+NV ++PI KDDEV++++GH K GKV V R K+V+ I+++ + KANG T
Sbjct: 35 SKELREKYNVIAIPIHKDDEVKIIKGHQK--VAGKVTAVRRSKYVINIDKLTKTKANGQT 92
Query: 376 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 471
V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 93 VPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 90.6 bits (215), Expect = 4e-17
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
+KE + VK +PIR+DDEV + G + G++ GKV+ V + + ++ REK NG T
Sbjct: 36 NKEQAETHGVKQLPIRRDDEVSINSGKFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQT 94
Query: 376 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR---LAALGKDK 495
+V +HPS C+I KLKM+K RK +++RR GR LA LG +K
Sbjct: 95 VHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = +1
Query: 145 ISVLLHI*GEC*CPLPXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 324
++ LLH E P S LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K
Sbjct: 36 LTPLLHGVIELLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQK 94
Query: 325 FVVYIERIQREK 360
V++++RI EK
Sbjct: 95 RVIHVKRISHEK 106
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 73.7 bits (173), Expect = 5e-12
Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = +1
Query: 190 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
P SK+L+++ ++ +P+R D V ++RG +KG + GKV +V K+ +Y++ +K +G
Sbjct: 32 PLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR-GKVTRVDYKRVRIYVDSASFKKPSG 90
Query: 370 ATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 486
Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 91 EAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 72.9 bits (171), Expect = 9e-12
Identities = 34/86 (39%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +1
Query: 202 ELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 381
ELR+KFN +S+P+R+ D V+++RG +KG + G+V++V K+ +Y+E E+ANG Y
Sbjct: 35 ELRKKFNRRSLPVRRGDMVRIMRGDFKGHE-GEVVEVDLKRLRIYVEGATIERANGEKVY 93
Query: 382 VGIHPSKCVIVKLKMNKD-RKAILDR 456
IHPS +I++ ++ R+ I++R
Sbjct: 94 YPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 70.9 bits (166), Expect = 4e-11
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +1
Query: 190 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
P S EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + R+KA+G
Sbjct: 9 PLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKADG 67
Query: 370 ATAYVGIHPSKCVIVKLKMNKD-RKAILDRRA 462
Y+ IH SK I KL N RK I++R+A
Sbjct: 68 TPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
SKELR + +K+MPIR+ D V++ G +KG GKV++V R+ + + +E I ++ N
Sbjct: 35 SKELRAEHKIKTMPIRRGDIVEIFTGGHKG--TGKVVEVRRRDYKICVEGINQKARNPEA 92
Query: 376 AYV--GIHPSKCVIVKLKMNKDRKAILDRRAK---GRLAALGK 489
V IHPS C+I +L MN R + RR + RLA +GK
Sbjct: 93 KPVPYPIHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
Score = 36.3 bits (80), Expect = 0.98
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 93 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 194
MK N VT+SRRK RK +F+A + R +MSS L
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRL 34
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 69.3 bits (162), Expect = 1e-10
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
S++L +++ +K + IRK D V+++RG G + GKV++V RK+ V IE + ++KA+G
Sbjct: 30 SEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE-GKVVEVDRKRGRVAIEGLTKKKADGTP 88
Query: 376 AYVGIHPSKCVIVKLKM-NKDRKAILDRRAKGRLAALGKDKGK 501
YV +H SK +I KL +K+R ++R+ K R K K
Sbjct: 89 VYVWVHASKVIITKLDTGDKERMDAIERKRKMREEYFSKKSPK 131
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 68.9 bits (161), Expect = 2e-10
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +1
Query: 190 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
P S EL+QK +K + +RK D V +VRG +KG + GKV V KK +++E KA+G
Sbjct: 32 PLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHE-GKVTSVDVKKGRIHVEGATLRKADG 90
Query: 370 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 465
IHPSK V+ +L ++ R+ L R K
Sbjct: 91 TEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/82 (37%), Positives = 54/82 (65%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
SKEL++K ++P+RK D V+++RG +KG + G+V++V K++ +Y+E ++ +G
Sbjct: 33 SKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGRE 91
Query: 376 AYVGIHPSKCVIVKLKMNKDRK 441
IHPS +I+KL +KD K
Sbjct: 92 VPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 63.3 bits (147), Expect = 7e-09
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
S EL+ + ++PIR +DEV+V RG +K ++ GKV+QVYRKK+V++I I R+K NG
Sbjct: 54 SAELKAQHGANAVPIRVNDEVRVTRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
Score = 47.2 bits (107), Expect = 5e-04
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Frame = +3
Query: 63 SRVVLAKSDR---MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 194
+RV LA S R MK++ VTSSRRK RK HF+APS RR LMS+ L
Sbjct: 7 TRVRLAVSLRRHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAAL 53
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/92 (33%), Positives = 52/92 (56%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
S+ELR+++ ++ P+R D V V G + G++ G + ++ + + VYIE K +G
Sbjct: 36 SRELRKEYGFRTFPLRTGDTVVVKGGKFDGKE-GVISKINYRDYKVYIEGCFVTKNDGTN 94
Query: 376 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 471
A V I+PSK I K + RK L+R+ + R
Sbjct: 95 ALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKG 285
S ELR K+NV+S+PIRKDDEVQVVRG YKG
Sbjct: 35 SSELRHKYNVRSIPIRKDDEVQVVRGSYKG 64
Score = 50.0 bits (114), Expect = 7e-05
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +3
Query: 93 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 194
MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
SK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E I K +G
Sbjct: 10 SKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGKQ 68
Query: 376 AYVGIHPSKCVIVKLKMNKDRK 441
GI P K I L +++ +
Sbjct: 69 KGFGISPEKLQITHLDLSRSER 90
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
SK+L++K+ +S+ + + D V ++RG +KG GKV +V K V IE +++EK G
Sbjct: 28 SKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEKTKGDK 86
Query: 376 AYVGIHPSKCVIVKL 420
V IH S ++ L
Sbjct: 87 FDVFIHTSNLLVTSL 101
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/77 (42%), Positives = 42/77 (54%)
Frame = +1
Query: 190 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
P SKELR K+ +S+ + + D V VVRG YK GKV V + V IE I++EK G
Sbjct: 26 PLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVSHVDTESGSVAIEGIKKEKGKG 84
Query: 370 ATAYVGIHPSKCVIVKL 420
V I SK V+ L
Sbjct: 85 DKFDVLIRASKVVVTGL 101
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/84 (34%), Positives = 53/84 (63%)
Frame = +1
Query: 190 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 369
P SKELR+K ++++PI+ D V+V RG+++G++ G+V+ + K + VY+ + ++
Sbjct: 44 PLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVIDIDPKYYRVYLS-LDTDR--- 98
Query: 370 ATAYVGIHPSKCVIVKLKMNKDRK 441
HPSK I+KL ++ D+K
Sbjct: 99 ---QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/75 (30%), Positives = 47/75 (62%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
SKE+++ K++ ++K+ E++V RG +KG+ GKV+Q+ ++ ++++ I R K
Sbjct: 35 SKEMQKYHKKKTLILKKNYEIKVKRGDFKGK-TGKVIQIKPEQQKIFVDNIFRNKFEKTN 93
Query: 376 AYVGIHPSKCVIVKL 420
+V + PS I+K+
Sbjct: 94 IFVPLKPSNIQIIKI 108
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = +1
Query: 196 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 375
S+ L +++ +S + D V+++RG +KG + GKV V + ++ + K +G
Sbjct: 36 SEALAKQYGTRSAAVITGDTVKIMRGDFKGTE-GKVQSVSLMDGTIAVDGVISTKVDGTE 94
Query: 376 AYVGIHPSKCVIVKLKMNKDRKA 444
I+PS +I KL+M R+A
Sbjct: 95 VPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 42.3 bits (95), Expect = 0.015
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3
Query: 93 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSP 191
M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 41.9 bits (94), Expect = 0.020
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 223 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 360
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVNVAK 45
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 0.74
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 232 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 348
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 34.3 bits (75), Expect = 4.0
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 226 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 360
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + K
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 33.9 bits (74), Expect = 5.2
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +1
Query: 238 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV 384
I+K D V VVRG KG+Q GKV++VY ER++R G YV
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVY--------ERVKRRDKQGNPVYV 45
>UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage
phiV10|Rep: Putative acetyltransferase - Phage phiV10
Length = 338
Score = 33.5 bits (73), Expect = 6.9
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = -1
Query: 444 CFAVF-IHLQLDNHTL*RVNADICCCTIGLFSLNPL--NVYNKL----FTIHLHHFANL- 289
CF VF I+ + N T+ + I CT+G++ ++PL ++ + ++IH F +
Sbjct: 254 CFMVFMINTPVKNKTILHIVKFISPCTLGIYLVHPLIIDILRRFLLDKYSIHPEMFIVIP 313
Query: 288 LAFVVSTYNLNFIVFANRHG 229
L+F+V +L +VF + G
Sbjct: 314 LSFIVFLISLAIVVFLRKFG 333
>UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2137
Score = 33.5 bits (73), Expect = 6.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 217 FNVKSMPIRKDDEVQVVRGHY-KGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 381
+ V MP++ E +++G Y K Q + ++F Y+ER EKA+ A+ Y
Sbjct: 88 YTVNPMPLKPSPEKSLIKGQYHKRMQSFQNATTNSREFASYLERRSPEKAHRASVY 143
>UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61;
Bacteria|Rep: 50S ribosomal protein L24 - Streptomyces
coelicolor
Length = 107
Score = 33.5 bits (73), Expect = 6.9
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 232 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 360
M I+K D VQV+ G KG+Q GKV+ + ++ V +E + R K
Sbjct: 1 MKIKKGDLVQVITGKDKGKQ-GKVIAAFPREDRVLVEGVNRVK 42
>UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Transcriptional regulator, GntR family - Clostridium
beijerinckii NCIMB 8052
Length = 235
Score = 33.1 bits (72), Expect = 9.1
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 187 LPXSKELRQKFNVKSMPIRKDDEVQVVRGH-YKGQQVGKVMQVYRKKFVVYIERI 348
LP +EL +KFNV IRK E+ V +G+ Y+ Q G ++ + K I I
Sbjct: 27 LPTEEELIKKFNVSKNTIRKAIEILVTKGYVYRVQGSGIFLREFAKNGCAQIRDI 81
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 33.1 bits (72), Expect = 9.1
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 232 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 360
+ ++K DEV ++ G YKG++ GKV++V+ ++ V + + K
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGVNLVK 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,949,222
Number of Sequences: 1657284
Number of extensions: 12880537
Number of successful extensions: 29294
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 28302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29260
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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