Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C22
(1433 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 2e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.005
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.010
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.17
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.91
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 2.1
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 28 2.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 6.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 7.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 8.4
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 42.3 bits (95), Expect = 2e-04
Identities = 37/139 (26%), Positives = 43/139 (30%), Gaps = 4/139 (2%)
Frame = -3
Query: 705 PPPPPXRXXPX----PAPAPSARXXPXRCPXERXAXXXXRPXLPPXXSSXPTXXTPXPPP 538
PPPPP R P P P S+R P LPP ++ T P P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 537 NTPPXXXXCSAPPXPPXFXSLXXXXXXXXXXXXPXXXHXXFXXXGXPGXXXXXPPXXPLS 358
+ P S PP P + P P P +
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP--------------PLPAGMPAA 466
Query: 357 PXPXXPAXPPPPPXPXXXP 301
P P PA P PPP P P
Sbjct: 467 P-PLPPAAPAPPPAPAPAP 484
Score = 40.3 bits (90), Expect = 6e-04
Identities = 57/251 (22%), Positives = 67/251 (26%), Gaps = 15/251 (5%)
Frame = -3
Query: 951 PLAXTTXPPXSLLPXSXPXPRXXXXPXXXRXRXXXPXPXPRXXXXPXXXLCSXXXXXRPX 772
P ++ PP + S P P P P P P + +P
Sbjct: 234 PSIPSSRPPERVPSLSAPAP--PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPP 291
Query: 771 XLPXAXXXXXSXGXXRXPXXXPPPPPPXRXXPXPAP---APSARXXPXRCPXERXAXXXX 601
LP + PPPPPP R P S P P R
Sbjct: 292 -LPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGS 350
Query: 600 RPXLPPXXSSXPTXXTPXPPPNT---PPXXXXCSA---PPXPP------XFXSLXXXXXX 457
P LPP S P P P+T PP A PP PP +L
Sbjct: 351 IP-LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNA 409
Query: 456 XXXXXXPXXXHXXFXXXGXPGXXXXXPPXXPLSPXPXXPAXPPPPPXPXXXPXXAGXXPX 277
P P PP P+ P P PP P P P
Sbjct: 410 SRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMG-APAAPPLPPSAPIAPPLPAGMPAAPP 468
Query: 276 XXPTXTARYPS 244
P A P+
Sbjct: 469 LPPAAPAPPPA 479
Score = 38.3 bits (85), Expect = 0.003
Identities = 50/219 (22%), Positives = 57/219 (26%), Gaps = 18/219 (8%)
Frame = -3
Query: 699 PPPXRXXPXPAPAPSARXXPXRCPXERXAXXXXRPXLPPXXS---SXPTXXTPXP--PPN 535
P P P PS+R P R P P +PP + S P P P P +
Sbjct: 224 PTSTSAPPIPPSIPSSRP-PERVPS---LSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVS 279
Query: 534 TPPXXXXCSAPPXPPXFXSLXXXXXXXXXXXXPXXXHXXFXXXGXP-------GXXXXXP 376
P S PP PP + P G P P
Sbjct: 280 MNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPP 339
Query: 375 PXXPLS------PXPXXPAXPPPPPXPXXXPXXAGXXPXXXPTXTARYPSXXXXXXPGXX 214
P P S P P PPPP P P P + P PG
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG-- 397
Query: 213 XXXXXXXXXXXXPHXPXPXXAXPPPYSPXXPXRXPPAXP 97
P PP P P PP+ P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 6/65 (9%)
Frame = -3
Query: 720 PXXXPP--PP--PPXRXXPXPAPAPSARXXPXRCP--XERXAXXXXRPXLPPXXSSXPTX 559
P PP PP PP P AP+A P P A P LPP + P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 558 XTPXP 544
P P
Sbjct: 480 PAPAP 484
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 720 PXXXPPPPPPXRXXPXPAPAPSA 652
P P PP P PAPAP+A
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAPAA 486
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 42.3 bits (95), Expect = 2e-04
Identities = 41/157 (26%), Positives = 46/157 (29%), Gaps = 2/157 (1%)
Frame = -3
Query: 720 PXXXPPPPPPXRXXPXPAPAPSARXXPXRCPXERXAXXXXRPXLPPXXSSXPTXXTPXPP 541
P PP P P P P P PS P P A +P + P+ P P
Sbjct: 1088 PSGIPPVPKPSVAAP-PVPKPSVAVPP--VPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK 1144
Query: 540 PN--TPPXXXXCSAPPXPPXFXSLXXXXXXXXXXXXPXXXHXXFXXXGXPGXXXXXPPXX 367
P+ PP APP P S+ P P PP
Sbjct: 1145 PSVAAPPVPAPSGAPPVPK--PSVAAPPVPAPSSGIPPVPKPAAGVPPVP-PPSEAPPVP 1201
Query: 366 PLSPXPXXPAXPPPPPXPXXXPXXAGXXPXXXPTXTA 256
P P PPP P AG P PT A
Sbjct: 1202 --KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Score = 39.9 bits (89), Expect = 8e-04
Identities = 50/226 (22%), Positives = 59/226 (26%), Gaps = 9/226 (3%)
Frame = -3
Query: 720 PXXXPPPPPPXRXXPXPAPAPSARXXPXRCPXER--XAXXXXRPXLPPXXSSXPTXXTPX 547
P PP P P P PSA P P P +P S P+ P
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV 1066
Query: 546 PPPNT--PPXXXXCSAPPXPPXFXSLXXXXXXXXXXXXPXXXHXXFXXXGXPGXXXXXPP 373
P P++ P APP P P G P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 372 XXPLSPXPXXPAXPPPPPXP----XXXPXXAGXXPXXXPTXTA-RYPSXXXXXXPGXXXX 208
P P P+ PP P P P +G P P+ A P+ P
Sbjct: 1127 SVAAPPVP-VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Query: 207 XXXXXXXXXXPHXPXPXXAXPPPYSPXXPXRXPPAXPXPXXEFPLV 70
P P + P P P P P P P V
Sbjct: 1186 AGVPPVPPPSEAPPVPKPSVGVP--PVPPPSTAPPVPTPSAGLPPV 1229
Score = 36.3 bits (80), Expect = 0.010
Identities = 46/224 (20%), Positives = 54/224 (24%), Gaps = 7/224 (3%)
Frame = -3
Query: 963 AXHLPLAXTTXPPXSLLPXSXPXPRXXXXPXXXRXRXXXPX-----PXPRXXXXPXXXLC 799
A +PL PP + + P P P + P P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Query: 798 SXXXXXRPXXLPXAXXXXXSXGXXRXPXXXPPPPPPXRXXPXPAPAPSARXXPXRCPXER 619
P +P + P PP P P P P PS P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGA 1139
Query: 618 XAXXXXRPXLPPXXSSXPTXXTPXPPPNTPPXXXXCSA-PPXPPXFXSLXXXXXXXXXXX 442
PP + P P PP S PP P +
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 441 XPXXXHXXFXXXGXPGXXXXXP-PXXPLSPXPXXPAXPPPPPXP 313
P P P P L P P A PP P P
Sbjct: 1200 VPKPS-VGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 720 PXXXPPPPPPXRXXPXPAPAPSARXXPXRCP-XERXAXXXXRPXLP-PXXSSXPT 562
P PP P P P P P P+A+ P P E + R +P P ++ P+
Sbjct: 1213 PSTAPPVPTPSAGLP-PVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPS 1266
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/60 (36%), Positives = 22/60 (36%)
Frame = -3
Query: 708 PPPPPPXRXXPXPAPAPSARXXPXRCPXERXAXXXXRPXLPPXXSSXPTXXTPXPPPNTP 529
PPPPPP P PAPAP P A P PP P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAP--------IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 378 PPXXPLSPXPXXPAXPPPPPXPXXXPXXAGXXPXXXP 268
P P+ P PPPPP P P AG P P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPP---PGVAGAGPPPPP 779
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -3
Query: 399 PGXXXXXPPXXPLSPXPXXPAXPPPPPXP 313
P PP P P PPPPP P
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.3 bits (80), Expect = 0.010
Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Frame = -3
Query: 720 PXXXPPPPPPXRXXPXPAPAPSARXXPXRCPXERXAXXXXRPXLPPXXSSXPTXXTPXPP 541
P P PP P P AP P P P +P SS P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP---SSLPPPAQPAAP 180
Query: 540 PNTPP--XXXXCSAPPXPP 490
+PP + PP PP
Sbjct: 181 VKSPPSAPSLPSAVPPMPP 199
Score = 29.9 bits (64), Expect = 0.91
Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = -3
Query: 720 PXXXPPPPPPXRXXPXPA--PAPSARXXPXRCPXERXAXXXXRPXLPPXXSSXPTXXTPX 547
P PP P + P P+ P P+ P + P + P +PP P P
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPV 211
Query: 546 PPPNTPP 526
++ P
Sbjct: 212 ANTSSRP 218
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Frame = -3
Query: 765 PXAXXXXXSXGXXRXPXXXPPPP---PPXRXXPXPAPAPSARXXPXRCPXERXAXXXXRP 595
P A R P PP P PP P P+ A P P +
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPS-KAPPIPSSLPPPAQPAAPVKS 183
Query: 594 XLPPXXSSXPTXXTPXPPPNTPP 526
PP S P+ P PP PP
Sbjct: 184 --PPSAPSLPSAVPPMPPKVPPP 204
Score = 27.5 bits (58), Expect = 4.8
Identities = 24/88 (27%), Positives = 26/88 (29%), Gaps = 11/88 (12%)
Frame = -3
Query: 720 PXXXPPPPPPXRXXPXPAPAPSA---------RXXPXRCPXERXAXXXXRPX-LPPXXSS 571
P PPP P P APS + P A RP P
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGH 227
Query: 570 XPTXXTPXPP-PNTPPXXXXCSAPPXPP 490
P + P PN P S PP PP
Sbjct: 228 APNVTSESPKFPNRGPSIPSASVPPVPP 255
Score = 27.1 bits (57), Expect = 6.4
Identities = 22/85 (25%), Positives = 23/85 (27%), Gaps = 3/85 (3%)
Frame = -3
Query: 378 PPXXPLSPXPXXPAXPP--PPPXPXXXPXXAGXXPXXXPTXTARYP-SXXXXXXPGXXXX 208
PP P P P PP PP P P P P+ P S P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP-PIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 207 XXXXXXXXXXPHXPXPXXAXPPPYS 133
P P PPP S
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPPLS 207
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 708 PPPPPPXRXXPXPAPAP 658
PPPPPP APAP
Sbjct: 5 PPPPPPAPAPAAAAPAP 21
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -3
Query: 708 PPPPPPXRXXPXPAPAPSARXXPXRCPXERXAXXXX-RPXLPPXXSSXPTXXTPXPPPNT 532
PPPPPP P PA + P + + P +PP + P PPP
Sbjct: 189 PPPPPP------PPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPP 242
Query: 531 PP 526
PP
Sbjct: 243 PP 244
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -3
Query: 597 PXLPPXXSSXPTXXTPXPPPNTPPXXXXCSAPPXPP 490
P +S P+ P PPP PP +A P
Sbjct: 174 PSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEP 209
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -3
Query: 378 PPXXPLSPXPXXPAXPPPPP 319
PP PA PPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPP 243
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.91
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +2
Query: 542 GGXGVXXVGXXXXXGGRXGRXXXXAXRSXGQRXGXXRAEGAGAGXGXXRXGGGGG 706
GG G G GGR G + G R G A G G R G GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 28.3 bits (60), Expect = 2.8
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 542 GGXGVXXVGXXXXXGGRXGRXXXXAXRSXGQRXGXXRAEGAGAGXGXXRXGGGGGGXXXG 721
GG G G GGR G G R G A G G G R G GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG---ARGGRGGRGGARGGRGGSSGGRG 65
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -3
Query: 399 PGXXXXXPPXXPLSPXPXXPAXPPPPPXPXXXPXXAGXXP 280
P PP P S P + P PPP P P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 29.1 bits (62), Expect = 1.6
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -3
Query: 699 PPPXRXXPXPAPAPSARXXPXRCPXERXAXXXXRPXLPPXXSSXPTXXTPXPP-PNTPPX 523
PP P P+ PS P P LPP SS +P PP P P
Sbjct: 1486 PPAVPNVPVPSMIPSVAQQP---PSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHPSA 1542
Query: 522 XXXCSAP 502
SAP
Sbjct: 1543 AALSSAP 1549
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 168 PXPXXAXPPPYSPXXPXRXPPAXPXP 91
P P PPP +P P P A P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -3
Query: 720 PXXXPPP---PPPXRXXPXPAPAPSARXXP 640
P PPP PPP P PA PSA P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -3
Query: 669 APAPSARXXPXRCPXERXAXXXXRPXLPPXXSSXPTXXTPXPPPNTPPXXXXCSAPPXPP 490
APA P R P P PP S P PPP+ PP + P PP
Sbjct: 1682 APAHPVSTPPVR-PQSAAPPQMSAPTPPPPPMSVP------PPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 708 PPPPPPXRXXPXPAPAPSARXXPXRCP 628
P PPPP P P AP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 378 PPXXPLSPXPXXPAXPPPPPXP 313
PP P P P PPPP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 378 PPXXPLSPXPXXPAXPPPPPXP 313
PP P P P+ PPPPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 576 SSXPTXXTPXPPPNTPPXXXXCSAPPXPP 490
+S P P PPP PP S PP PP
Sbjct: 2 ASLPPGNPPPPPP--PPGFEPPSQPPPPP 28
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 720 PXXXPPPPPPXRXXPXPAPAP 658
P PPPPPP P P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPP 26
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = +3
Query: 339 RGXXGXGRGGXXGVXXXXNRAXXXXXXXXGXGXGXXPXGXXGXGGPGRXXEXXXGGPSXX 518
RG G G GG G G G G G GG G GGP
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHG--GHGGFGGGPGGFEGGPGGF 240
Query: 519 XGXGGCWGGG 548
G G +GGG
Sbjct: 241 GGGPGGFGGG 250
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 28.3 bits (60), Expect = 2.8
Identities = 26/93 (27%), Positives = 28/93 (30%), Gaps = 2/93 (2%)
Frame = -3
Query: 591 LPPXXSSXPTXXTPXPPPNTPPXXXXCSAPPXP--PXFXSLXXXXXXXXXXXXPXXXHXX 418
LPP S P P NTP S PP P P + P
Sbjct: 210 LPPGFS--PATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVPPLSIPNVLPFTAAQH 267
Query: 417 FXXXGXPGXXXXXPPXXPLSPXPXXPAXPPPPP 319
F PG P+ P P PPPPP
Sbjct: 268 F-----PGMPAMPMMNVPMGPG-GAPLVPPPPP 294
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/64 (26%), Positives = 21/64 (32%)
Frame = -3
Query: 720 PXXXPPPPPPXRXXPXPAPAPSARXXPXRCPXERXAXXXXRPXLPPXXSSXPTXXTPXPP 541
P PPPP P A R P + P P P +S +P P
Sbjct: 921 PAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASR-ISSSPNMP 979
Query: 540 PNTP 529
P+ P
Sbjct: 980 PSNP 983
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.6 bits (46), Expect(2) = 7.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 146 PPPTPPXXPXVS 111
PPP PP P VS
Sbjct: 945 PPPPPPPPPLVS 956
Score = 22.2 bits (45), Expect(2) = 7.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 170 PLLXXXPXPPPTPP 129
P + P PPP PP
Sbjct: 899 PTIITHPTPPPPPP 912
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 8.4
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = -3
Query: 708 PPPPPPXRXXP--XPAPAPSARXXPXRCPXERXAXXXXRPXLP-PXXSSXPTXXTPXPP- 541
PPPPPP P+ AP++ P P A P +P P + P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATA-ISGNPGMPAPVPLTGKETAVPLSSM 1940
Query: 540 PNTPP 526
PN PP
Sbjct: 1941 PNAPP 1945
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,756,732
Number of Sequences: 5004
Number of extensions: 20857
Number of successful extensions: 393
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 798845556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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