Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C20
(1077 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 27 0.058
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 27 0.059
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 27 0.060
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 0.29
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 0.29
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 27 0.35
AF067219-2|AAC17035.1| 74|Caenorhabditis elegans Hypothetical ... 33 0.46
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 0.58
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 0.58
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 0.59
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 26 1.0
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 26 1.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 26 1.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 26 1.0
AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical ... 25 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.9
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 25 2.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 2.5
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 25 2.9
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 25 2.9
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 25 2.9
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 25 2.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 3.3
AF067219-1|AAC17036.1| 74|Caenorhabditis elegans Hypothetical ... 30 3.3
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 26 4.8
AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical... 25 6.9
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 24 7.9
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 24 7.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 10.0
AF025466-4|AAY55877.1| 173|Caenorhabditis elegans Hypothetical ... 28 10.0
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 27.5 bits (58), Expect(2) = 0.058
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQRGXFPRGG 293
PPPPPPP F +P G
Sbjct: 66 PPPPPPPAFGGLGGGAAYPGAG 87
Score = 27.1 bits (57), Expect(2) = 0.058
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P G PPPPPPP
Sbjct: 58 PPIGYGAPPPPPPP 71
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 27.5 bits (58), Expect(2) = 0.059
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQRGXFPRGG 293
PPPPPPP F +P G
Sbjct: 66 PPPPPPPAFGGLGGGAAYPGAG 87
Score = 27.1 bits (57), Expect(2) = 0.059
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P G PPPPPPP
Sbjct: 58 PPIGYGAPPPPPPP 71
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 27.5 bits (58), Expect(2) = 0.060
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQRGXFPRGG 293
PPPPPPP F +P G
Sbjct: 66 PPPPPPPAFGGLGGGAAYPGAG 87
Score = 27.1 bits (57), Expect(2) = 0.060
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P G PPPPPPP
Sbjct: 58 PPIGYGAPPPPPPP 71
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.5 bits (58), Expect(2) = 0.29
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P G PPPPPPP
Sbjct: 301 PSSGMWPPPPPPPP 314
Score = 24.6 bits (51), Expect(2) = 0.29
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 355 PPPPPPXFXXXPQRGXFP 302
PPPPPP P G P
Sbjct: 327 PPPPPPSRFGPPGMGGMP 344
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.5 bits (58), Expect(2) = 0.29
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P G PPPPPPP
Sbjct: 291 PSSGMWPPPPPPPP 304
Score = 24.6 bits (51), Expect(2) = 0.29
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 355 PPPPPPXFXXXPQRGXFP 302
PPPPPP P G P
Sbjct: 317 PPPPPPSRFGPPGMGGMP 334
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 27.5 bits (58), Expect(2) = 0.35
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQRGXFPR 299
PPPPPPP + G PR
Sbjct: 364 PPPPPPPSAASNGRSGYLPR 383
Score = 24.2 bits (50), Expect(2) = 0.35
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P+ PPPPPPP
Sbjct: 353 PQPQSLVPPPPPPP 366
>AF067219-2|AAC17035.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.14 protein.
Length = 74
Score = 32.7 bits (71), Expect = 0.46
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 355 PPPPPPXFXXXPQRGXFPRGG 293
PPPPPP + PQ G +P G
Sbjct: 53 PPPPPPQYAAAPQGGAYPTAG 73
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 979 LSPXXXKPKKXPXPPXXLPPPPXXPXP 1059
L P P P PP PPPP P P
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQRGXFPRGGF 290
PPPPPPP P P GGF
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGF 780
Score = 27.1 bits (57), Expect(2) = 0.58
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P G PPPPPPP
Sbjct: 763 PPPGGCPPPPPPPP 776
Score = 23.8 bits (49), Expect(2) = 0.58
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 358 PPPPPPPXFXXXP 320
PPPPPP F P
Sbjct: 772 PPPPPPGGFKGGP 784
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 979 LSPXXXKPKKXPXPPXXLPPPPXXPXP 1059
L P P P PP PPPP P P
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQRGXFPRGGF 290
PPPPPPP P P GGF
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGF 780
Score = 27.1 bits (57), Expect(2) = 0.58
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P G PPPPPPP
Sbjct: 763 PPPGGCPPPPPPPP 776
Score = 23.8 bits (49), Expect(2) = 0.58
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 358 PPPPPPPXFXXXP 320
PPPPPP F P
Sbjct: 772 PPPPPPGGFKGGP 784
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 979 LSPXXXKPKKXPXPPXXLPPPPXXPXP 1059
L P P P PP PPPP P P
Sbjct: 334 LPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQRGXFPRGGF 290
PPPPPPP P P GGF
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGF 363
Score = 27.1 bits (57), Expect(2) = 0.59
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P G PPPPPPP
Sbjct: 346 PPPGGCPPPPPPPP 359
Score = 23.8 bits (49), Expect(2) = 0.59
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 358 PPPPPPPXFXXXP 320
PPPPPP F P
Sbjct: 355 PPPPPPGGFKGGP 367
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 25.8 bits (54), Expect(2) = 1.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQR 314
PPPPPPP PQ+
Sbjct: 791 PPPPPPPPPMLPPQQ 805
Score = 24.2 bits (50), Expect(2) = 1.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P PPPPPPP
Sbjct: 785 PLTAPIPPPPPPPP 798
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 25.8 bits (54), Expect(2) = 1.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQR 314
PPPPPPP PQ+
Sbjct: 690 PPPPPPPPPMLPPQQ 704
Score = 24.2 bits (50), Expect(2) = 1.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P PPPPPPP
Sbjct: 684 PLTAPIPPPPPPPP 697
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 25.8 bits (54), Expect(2) = 1.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 400 PFXFFFXPKXGXXKPPPPPPP 338
P F P PPPPPPP
Sbjct: 617 PQSFGMAPISSAAPPPPPPPP 637
Score = 24.2 bits (50), Expect(2) = 1.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQRG 311
PPPPPPP P G
Sbjct: 630 PPPPPPPPPMGLPAVG 645
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 25.8 bits (54), Expect(2) = 1.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 400 PFXFFFXPKXGXXKPPPPPPP 338
P F P PPPPPPP
Sbjct: 443 PQSFGMAPISSAAPPPPPPPP 463
Score = 24.2 bits (50), Expect(2) = 1.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQRG 311
PPPPPPP P G
Sbjct: 456 PPPPPPPPPMGLPAVG 471
>AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical
protein C18E3.6 protein.
Length = 457
Score = 25.0 bits (52), Expect(2) = 1.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 370 GXXKPPPPPPP 338
G PPPPPPP
Sbjct: 218 GAPTPPPPPPP 228
Score = 25.0 bits (52), Expect(2) = 1.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQR 314
PPPPPPP P +
Sbjct: 223 PPPPPPPISLIAPSK 237
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 985 PXXXKPKKXPXPPXXLPPPPXXPXPXXP 1068
P P+ P PP PPPP P P P
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPPMCP 75
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 13/46 (28%)
Frame = -3
Query: 400 PFXFFFXPKXGXXKPPPP-------------PPPXFXXXPQRGXFP 302
PF FF P G PPPP PPP F P RG P
Sbjct: 292 PFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMP 337
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 13/46 (28%)
Frame = -3
Query: 400 PFXFFFXPKXGXXKPPPP-------------PPPXFXXXPQRGXFP 302
PF FF P G PPPP PPP F P RG P
Sbjct: 292 PFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMP 337
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 24.6 bits (51), Expect(2) = 2.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 358 PPPPPPPXFXXXP 320
PPPPPPP P
Sbjct: 266 PPPPPPPEVSIAP 278
Score = 24.2 bits (50), Expect(2) = 2.4
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 361 KPPPPPPP 338
+PPPPPPP
Sbjct: 263 QPPPPPPP 270
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 955 PXXXXXXFLSPXXXKPKKXPXPPXXLPPPPXXPXPXXP 1068
P F P P P P PPPP P P P
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
Score = 25.8 bits (54), Expect(2) = 2.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 355 PPPPPPXFXXXPQRGXFPRGGFP 287
PPPPPP P PR P
Sbjct: 72 PPPPPPPMPCPPPPPPMPRPSCP 94
Score = 23.0 bits (47), Expect(2) = 2.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 385 FXPKXGXXKPPPPPP 341
F P PPPPPP
Sbjct: 64 FCPPPPICPPPPPPP 78
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P+ PPPPPPP
Sbjct: 259 PREKSVPPPPPPPP 272
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQR 314
PPPPPP P R
Sbjct: 269 PPPPPPKPVSREPSR 283
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P+ PPPPPPP
Sbjct: 259 PREKSVPPPPPPPP 272
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQR 314
PPPPPP P R
Sbjct: 269 PPPPPPKPVSREPSR 283
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P+ PPPPPPP
Sbjct: 244 PREKSVPPPPPPPP 257
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQR 314
PPPPPP P R
Sbjct: 254 PPPPPPKPVSREPSR 268
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 379 PKXGXXKPPPPPPP 338
P+ PPPPPPP
Sbjct: 244 PREKSVPPPPPPPP 257
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQR 314
PPPPPP P R
Sbjct: 254 PPPPPPKPVSREPSR 268
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 3.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 982 SPXXXKPKKXPXPPXXLPPPPXXPXP 1059
+P +P P PP PPPP P P
Sbjct: 126 APYQQQPPPPPPPPHYPPPPPHYPPP 151
>AF067219-1|AAC17036.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.15 protein.
Length = 74
Score = 29.9 bits (64), Expect = 3.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 352 PPPPPXFXXXPQRGXFPRGG 293
PPPPP + PQ G +P G
Sbjct: 54 PPPPPQYAAAPQGGAYPTAG 73
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 26.2 bits (55), Expect(2) = 4.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQ 317
PPPPPPP PQ
Sbjct: 756 PPPPPPPLAAAPPQ 769
Score = 21.4 bits (43), Expect(2) = 4.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3
Query: 379 PKXGXXKPPPPPP 341
P PPPPPP
Sbjct: 750 PSSTPPPPPPPPP 762
>AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical
protein Y37D8A.17 protein.
Length = 271
Score = 25.0 bits (52), Expect(2) = 6.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 358 PPPPPPPXFXXXPQ 317
PPPPPPP + Q
Sbjct: 27 PPPPPPPAYSSISQ 40
Score = 22.2 bits (45), Expect(2) = 6.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 370 GXXKPPPPPPP 338
G PPPPPP
Sbjct: 22 GSSSAPPPPPP 32
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.8 bits (49), Expect(2) = 7.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 358 PPPPPPP 338
PPPPPPP
Sbjct: 765 PPPPPPP 771
Score = 23.0 bits (47), Expect(2) = 7.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 385 FXPKXGXXKPPPPPP 341
F P PPPPPP
Sbjct: 715 FRPTSRPKTPPPPPP 729
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.8 bits (49), Expect(2) = 7.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 358 PPPPPPP 338
PPPPPPP
Sbjct: 765 PPPPPPP 771
Score = 23.0 bits (47), Expect(2) = 7.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 385 FXPKXGXXKPPPPPP 341
F P PPPPPP
Sbjct: 715 FRPTSRPKTPPPPPP 729
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 985 PXXXKPKKXPXPPXXLPPPPXXPXP 1059
P +P PP LPPPP P P
Sbjct: 64 PPWRRPPWHRRPPWGLPPPPPPPEP 88
>AF025466-4|AAY55877.1| 173|Caenorhabditis elegans Hypothetical
protein T23F4.5 protein.
Length = 173
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 361 KPPPPPPPXFXXXPQRGXFPRGGF 290
KPPPPPP +RG + R F
Sbjct: 82 KPPPPPPQRSEDYQERGHYRRDPF 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,617,926
Number of Sequences: 27780
Number of extensions: 225124
Number of successful extensions: 3332
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2887577688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -