Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C20
(1077 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 1.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 2.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 2.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 2.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 2.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 2.7
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 6.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 6.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 6.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 6.2
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 1.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 379 PKXGXXKPPPPPP 341
P G +PPPPPP
Sbjct: 1852 PVSGSPEPPPPPP 1864
Score = 24.2 bits (50), Expect = 2.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 378 PKXGXXNPPPPPP 340
P G PPPPPP
Sbjct: 1852 PVSGSPEPPPPPP 1864
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.2 bits (50), Expect = 2.0
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 361 KPPPPPPP 338
+PPPPPPP
Sbjct: 1354 QPPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 358 PPPPPPP 338
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.7
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -3
Query: 361 KPPPPPPPXFXXXPQRGXFPRGGFPLFKKXRALXXGG 251
KP PPPPP P + F + K A+ G
Sbjct: 340 KPAPPPPPPSSSGPDSAKLDK-IFDIATKENAMLLSG 375
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 2.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 206 FLGXLTPPPQGPFRGIEKTXPIF 138
+ G P P GPF I++ P F
Sbjct: 353 YYGNFPPRPMGPFVSIQEQIPRF 375
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 2.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 206 FLGXLTPPPQGPFRGIEKTXPIF 138
+ G P P GPF I++ P F
Sbjct: 353 YYGNFPPRPMGPFVSIQEQIPRF 375
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 2.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 206 FLGXLTPPPQGPFRGIEKTXPIF 138
+ G P P GPF I++ P F
Sbjct: 353 YYGNFPPRPMGPFVSIQEQIPRF 375
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 2.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 206 FLGXLTPPPQGPFRGIEKTXPIF 138
+ G P P GPF I++ P F
Sbjct: 342 YYGNFPPRPMGPFVSIQEQIPRF 364
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 6.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 206 FLGXLTPPPQGPFRGIEKTXPIF 138
+ G P P GPF +++ P F
Sbjct: 120 YYGNFPPRPMGPFVSMQEQIPRF 142
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 6.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 206 FLGXLTPPPQGPFRGIEKTXPIF 138
+ G P P GPF +++ P F
Sbjct: 120 YYGNFPPRPMGPFVSMQEQIPRF 142
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 6.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 206 FLGXLTPPPQGPFRGIEKTXPIF 138
+ G P P GPF +++ P F
Sbjct: 120 YYGNFPPRPMGPFVSMQEQIPRF 142
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 6.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 206 FLGXLTPPPQGPFRGIEKTXPIF 138
+ G P P GPF +++ P F
Sbjct: 120 YYGNFPPRPMGPFVSMQEQIPRF 142
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2
Query: 206 FLGXLTPPPQGPFRGIEKTXP 144
+ G P P GPF I++ P
Sbjct: 353 YYGNFPPRPMGPFVSIQEQIP 373
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,425
Number of Sequences: 438
Number of extensions: 4283
Number of successful extensions: 87
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 36029799
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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