Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_C19
         (951 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   2.3  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    23   5.4  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    23   5.4  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    23   5.4  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    23   5.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = +1

Query: 10   QLPILTIWGIPLRFESQLELRQRGTTMAPPTPWALVIPPAFXPGPGGVLSPEIQPV 177
            Q P  +  GIP     ++     G    P TP+    PP F P P    +P +  +
Sbjct: 1129 QKPFTSPGGIPGPNGIKMPSFMEGMPHLPFTPFNFWNPPPFMPSPFMAGAPNVPTI 1184


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 49  FESQLELRQRGTTMAPPTPWALVIPP 126
           F S  E   R   + PPTP+   IPP
Sbjct: 132 FVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 49  FESQLELRQRGTTMAPPTPWALVIPP 126
           F S  E   R   + PPTP+   IPP
Sbjct: 132 FVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 49  FESQLELRQRGTTMAPPTPWALVIPP 126
           F S  E   R   + PPTP+   IPP
Sbjct: 132 FVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 49  FESQLELRQRGTTMAPPTPWALVIPP 126
           F S  E   R   + PPTP+   IPP
Sbjct: 132 FVSMQEQIPRFRYIGPPTPFPRFIPP 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,130
Number of Sequences: 438
Number of extensions: 6174
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31202262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)