Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_C18
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical p...    33   0.28 
Z54342-5|CAA91147.1|  457|Caenorhabditis elegans Hypothetical pr...    32   0.49 
Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical pr...    32   0.65 
U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    31   0.85 
Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z49913-6|CAA90145.2|  460|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z70035-8|CAA93868.2|  446|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z70035-6|CAA93866.1|  444|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81479-6|CAB03938.1|  411|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z47745-4|CAA87665.2|  445|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z70035-9|CAA93870.2|  450|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF026152-1|AAB81847.1|  117|Caenorhabditis elegans chitinase pro...    28   7.9  

>Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical
           protein C08H9.4b protein.
          Length = 465

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 459 LLXSQQARTAFINSRVLLAEXYGFXGIDLAWAVPK 563
           L+ ++ +RT F+NS V   E Y   GI++ W  P+
Sbjct: 197 LVFNETSRTVFVNSIVSFVEKYDIDGIEMFWMWPR 231


>Z54342-5|CAA91147.1|  457|Caenorhabditis elegans Hypothetical
           protein C08H9.10 protein.
          Length = 457

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 450 YNLLLXSQQARTAFINSRVLLAEXYGFXGIDLAWAVPK 563
           ++ L+ ++ +R  F+NS V   + Y   GI++ W  PK
Sbjct: 187 FSRLVSNETSRNVFVNSIVSFVQKYDIDGIEIFWTWPK 224


>Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical
           protein T13H5.3 protein.
          Length = 626

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 435 EEPEKYNLLLXSQQARTAFINSRVLLAEXYGFXGIDLAWAVP 560
           E  + +++L      R+  I++ V + + YGF G+D+ W  P
Sbjct: 104 ENSQYFSVLTADHSRRSILISNFVKVIKEYGFDGVDIDWEYP 145


>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 468 SQQARTAFINSRVLLAEXYGFXGIDLAWAVP 560
           S  +R  FI+S +     +GF GID+ W  P
Sbjct: 151 SSASRKVFIDSAITFVRTWGFDGIDIDWEYP 181


>Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical
           protein R09D1.7 protein.
          Length = 369

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 459 LLXSQQARTAFINSRVLLAEXYGFXGIDLAWAVP 560
           +L S   R  F+N+     + YG  GIDL W  P
Sbjct: 89  VLNSPNRRKVFLNATTSFLQIYGIDGIDLFWKWP 122


>Z49913-6|CAA90145.2|  460|Caenorhabditis elegans Hypothetical
           protein ZK938.6 protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +3

Query: 447 KYNLLLXSQQARTAFINSRVLLAEXYGFXGIDLAWAVPK 563
           +++ L+ ++ +R  F+NS       Y   G+D+ W  PK
Sbjct: 188 EFSGLVSNETSRNLFVNSIATFVRDYDIDGVDIFWTWPK 226


>Z70035-8|CAA93868.2|  446|Caenorhabditis elegans Hypothetical
           protein R09D1.8 protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 435 EEPEKYNLLLXSQQARTAFINSRVLLAEXYGFXGIDLAWAVP 560
           +    +  +L S   +  FINS V   + Y   G+DL W  P
Sbjct: 158 DNSNNFKPVLSSPDRKKLFINSTVSFLQTYDIDGVDLYWKWP 199


>Z70035-6|CAA93866.1|  444|Caenorhabditis elegans Hypothetical
           protein R09D1.6 protein.
          Length = 444

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 462 LXSQQARTAFINSRVLLAEXYGFXGIDLAWAVP 560
           L S   +  FINS V   + Y   G+DL W  P
Sbjct: 165 LSSPDRKKLFINSTVSFLQTYDIDGVDLYWKWP 197


>Z81479-6|CAB03938.1|  411|Caenorhabditis elegans Hypothetical
           protein C34F6.7 protein.
          Length = 411

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = -1

Query: 556 TAQARSIPXKPYXSANSTRELMKAVRACCXSSRRLYFSGSSVSASPPTDNNTVRP 392
           T + ++    P  +  +   ++K  R+C    +R++F       +PP +N   RP
Sbjct: 301 THRVKASEKDPCFACGTEENMVKIERSCDGQEQRVFFHDIGARFTPPCENCICRP 355


>Z47745-4|CAA87665.2|  445|Caenorhabditis elegans Hypothetical
           protein T19H5.1 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 435 EEPEKYNLLLXSQQARTAFINSRVLLAEXYGFXGIDLAWAVPKS 566
           E  + ++ ++ S+  R  FINS +   +     GIDL W  P S
Sbjct: 144 ENSQNFSPVIESEYRRQIFINSILTFLKENDLDGIDLFWEWPCS 187


>Z70035-9|CAA93870.2|  450|Caenorhabditis elegans Hypothetical
           protein R09D1.10 protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 459 LLXSQQARTAFINSRVLLAEXYGFXGIDLAWAVPK 563
           ++ S   +  FINS V   + Y   G+DL W  P+
Sbjct: 162 VISSPDRKKIFINSIVSFLKKYDIDGVDLFWKWPR 196


>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
           protein C25A8.4 protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 248 LSFCTHLLYGYAGIQPDT-YKLVSLNENLDIDRTHDNYRAITSLKAKYPGSHCII 409
           ++ CTHL+YG   I  DT Y   S+++ ++     DN R    L+  +P +  ++
Sbjct: 48  ITTCTHLVYGSIPIDRDTGYPQYSVSD-VESGYDIDNIRTFMRLRKYHPNAKLLM 101


>AF026152-1|AAB81847.1|  117|Caenorhabditis elegans chitinase
           protein.
          Length = 117

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 468 SQQARTAFINSRVLLAEXYGFXGIDLAW 551
           S  +R  FI+S       +GF GIDL W
Sbjct: 90  SSASRKVFIDSATTSVRTWGFDGIDLDW 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,419,392
Number of Sequences: 27780
Number of extensions: 324075
Number of successful extensions: 764
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)