Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_C17
         (923 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   2.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   4.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   4.4  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 259 SRTGPFTFLMI*RLVSPMNSTFT*VHWPLRTSTAE 155
           SRT P T   I R+V  ++  F+ +   L+ ST E
Sbjct: 184 SRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCE 218


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 256 RTGPFTFLMI*RLVSPMNSTFT*VHWPLRTST 161
           RTG FTFLM+  ++S   +TF  V   L   T
Sbjct: 76  RTGSFTFLMVVAVLS-SGTTFKLVAKTLENMT 106


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 256 RTGPFTFLMI*RLVSPMNSTFT*VHWPLRTST 161
           RTG FTFLM+  ++S   +TF  V   L   T
Sbjct: 76  RTGSFTFLMVVAVLS-SGTTFKLVAKTLENMT 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,721
Number of Sequences: 336
Number of extensions: 2490
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25858250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)