Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_C17
         (923 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p pro...    66   5e-11
AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA...    66   5e-11
AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-P...    62   1e-09
BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p pro...    37   0.045

>AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p
           protein.
          Length = 65

 Score = 66.5 bits (155), Expect = 5e-11
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3

Query: 174 RGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 275
           +GQCTQVKVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 20  QGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53



 Score = 38.7 bits (86), Expect = 0.011
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +2

Query: 116 MDKPNVLARVVKVLGRTGSQG 178
           MDKP V ARV+KVLGRTGSQG
Sbjct: 1   MDKPVVWARVMKVLGRTGSQG 21


>AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA
           protein.
          Length = 65

 Score = 66.5 bits (155), Expect = 5e-11
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3

Query: 174 RGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 275
           +GQCTQVKVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 20  QGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53



 Score = 38.7 bits (86), Expect = 0.011
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +2

Query: 116 MDKPNVLARVVKVLGRTGSQG 178
           MDKP V ARV+KVLGRTGSQG
Sbjct: 1   MDKPVVWARVMKVLGRTGSQG 21


>AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-PA
           protein.
          Length = 64

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = +3

Query: 174 RGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 275
           +GQCTQV+VEF+G+ SRQIIRNVKGPVR GDIL+
Sbjct: 19  QGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILS 52



 Score = 33.9 bits (74), Expect = 0.32
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +2

Query: 116 MDKPNVLARVVKVLGRTGSQGPVYSSEGRVHW-GDQ 220
           MDKP   ARVV++LGRTGSQG    ++ RV + GDQ
Sbjct: 1   MDKPQY-ARVVEILGRTGSQG--QCTQVRVEFLGDQ 33


>BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p
           protein.
          Length = 73

 Score = 36.7 bits (81), Expect = 0.045
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 174 RGQCTQVKVEFIGETSRQIIRNVKGPVRDGDI 269
           RG  T+V+V+ + +   Q +R VKGPVR GD+
Sbjct: 19  RGILTEVRVQLVDQPKMQFMRTVKGPVRLGDV 50



 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +2

Query: 137 ARVVKVLGRTGSQGPVYSSEGRVHWGDQPSDHQERERTGP*R 262
           ARV+K+L R G++G +  +E RV   DQP     R   GP R
Sbjct: 7   ARVIKILNRIGARGIL--TEVRVQLVDQPKMQFMRTVKGPVR 46


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,694,326
Number of Sequences: 53049
Number of extensions: 479086
Number of successful extensions: 949
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)