Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C15
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0931 - 21647562-21649037 32 0.53
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 31 0.93
08_02_0186 + 13965960-13966424 31 1.2
03_02_0907 - 12297523-12297891,12298051-12298200,12298356-122984... 31 1.2
01_01_0570 - 4231100-4232560 31 1.2
11_07_0007 - 27262229-27262638,27263252-27263312 30 2.1
09_02_0274 + 6611555-6611615,6612229-6612638 30 2.1
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 3.8
12_02_1174 - 26696869-26698191 29 5.0
05_04_0204 - 19022329-19023990 29 5.0
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 29 6.6
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 6.6
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343 29 6.6
01_05_0213 - 19355785-19356522 29 6.6
12_02_0299 - 17051570-17052474,17053542-17053755 28 8.7
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 28 8.7
>10_08_0931 - 21647562-21649037
Length = 491
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 537 P*RASQKSTLXSE-VAKTRQDYKDTRRFPPXKLPSCAPPVSDPWPLTGIPVP 689
P R S S+L E +AK +DY RR P P PP P+ + G P
Sbjct: 239 PKRLSPASSLSKETLAKASEDYSSRRRSPYKSSPPAPPPPPPPFLVHGYHPP 290
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 31.5 bits (68), Expect = 0.93
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +3
Query: 618 PPXKLPSCAPPVSDPWPLTGIPVPPLSPLSGXAWPLSHXS 737
PP +PS APP P P P PP +PLS W S S
Sbjct: 42 PPSPVPSPAPP---PPPHRPSPSPPPNPLSSKLWLSSKLS 78
>08_02_0186 + 13965960-13966424
Length = 154
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +3
Query: 639 CAPPVSDPWPLTGIPVPPLSPLSGXAWPLSH 731
C PP P P+ G P PP P S A P SH
Sbjct: 54 CQPPPGQPLPIYGYPSPP--PPSQPAGPSSH 82
>03_02_0907 -
12297523-12297891,12298051-12298200,12298356-12298463,
12298693-12298815,12299039-12299312,12304895-12304973,
12305222-12305256,12305372-12305429,12306185-12307274
Length = 761
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 519 FHRLRPP*RASQKSTLXSEVAKTRQDYKDTRRFPPXKLPSCAPPVSDPWPLTGIPVPP 692
F + P R + KS + TRQ K ++ +PSC+ +D W G+ PP
Sbjct: 384 FSGIIPVTRRTAKSLKRVWDSVTRQQQKQEQQLQKQAIPSCSSSFADTWDPWGLLSPP 441
>01_01_0570 - 4231100-4232560
Length = 486
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = -1
Query: 754 GDTYSREX*ESGHAXPERGERGGTGIPVSGQGSETGGAHEGSLXGG 617
GD +S G GE GG G+ G G TGG G L GG
Sbjct: 46 GDKHSTATISGGGVGVGGGEGGGVGVG-GGVGGGTGGGAAGGLGGG 90
>11_07_0007 - 27262229-27262638,27263252-27263312
Length = 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 721 GHAXPERGERGGTGIPVSGQGSETGGAHEGSLXGGKR 611
G RG GG G +SG+G +GGA GS GG+R
Sbjct: 102 GAGGSHRGGGGGRGGGLSGRGHGSGGA-GGSSGGGRR 137
>09_02_0274 + 6611555-6611615,6612229-6612638
Length = 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 721 GHAXPERGERGGTGIPVSGQGSETGGAHEGSLXGGKR 611
G RG GG G +SG+G +GGA GS GG+R
Sbjct: 102 GAGGSHRGGGGGRGGGLSGRGHGSGGA-GGSSGGGRR 137
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 621 PXKLPSCAPPVS-DPWPLTGIPVPPLSP 701
P P C PP+ P P T P PPLSP
Sbjct: 1150 PSDSPPCQPPLPPSPPPATPPPPPPLSP 1177
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 618 PPXKLPSCAPPVSDPWPLTGIPVPPLSP 701
PP + PS PPV P P +PP SP
Sbjct: 194 PPTRPPSVKPPVVQPKPQPPPTLPPPSP 221
>05_04_0204 - 19022329-19023990
Length = 553
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +3
Query: 528 LRPP*RASQKSTLXSEVAKTRQDYKDTRRFPPXKLPSCAPPVSDPWPLTGIPVPPLSPLS 707
+R P R + L + ++D R P + + A +SD P G P PP P S
Sbjct: 1 MRSPSRPLPRLLLLRRRCLSSAPHRDRRFLPLLRFAALAKELSDHRPRPGTPPPPTRPRS 60
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 621 PXKLPSCAPPVSDPWPLTGI-PVPPLSPLSGXAWPLSHXS 737
P + P PP S P P+T + P PP P + A S S
Sbjct: 425 PSQQPQPPPPPSHPTPITSVAPAPPPPPPAAAAAAASQPS 464
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 618 PPXKLPSCAPPVSDPWPLTGIPVPPLSPLSGXAWP 722
PP +P APP P P P PP P G A P
Sbjct: 141 PPPHVPKAAPPPPPPPPPHAPPGPP--PTKGVATP 173
>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
Length = 356
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 338 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASQRPGTV 493
P PRS RC GCG R Q TQR P N IT E TC ++ P +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203
>01_05_0213 - 19355785-19356522
Length = 245
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 633 PSCAPPVSDPWPLTGIPVPPLSP 701
P C PP+S P+ P PP SP
Sbjct: 28 PYCPPPLSPPYSPAQSPPPPTSP 50
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 618 PPXKLPSCAPPVSDPWPLTGIPVPPLSPL 704
PP P PP S PWP PPL+PL
Sbjct: 321 PPPPPPPPPPPPSFPWPF-----PPLAPL 344
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 600 KDTRRFPPXKLPSCAPPVSDPWPLTGIPVPPLSPLSGXAWP 722
K + +PP PS PPV P+ P PP SP G +P
Sbjct: 665 KGSTCYPPPPPPSSTPPVE---PVAVFPPPP-SPACGVYYP 701
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,531,462
Number of Sequences: 37544
Number of extensions: 493312
Number of successful extensions: 1987
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1966
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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