Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C13
(912 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 9e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 4e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 40 5e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.001
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.011
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.032
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.032
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.098
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.098
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.23
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.40
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 1.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.1
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 2.1
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 2.8
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 6.5
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 42.3 bits (95), Expect = 9e-05
Identities = 27/82 (32%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Frame = +3
Query: 507 GPPPLXPXXXXXPPPPPXPXXAPPXXFXPX--TRGGXXXXXPXPPXXXXRXXNXXAPPPG 680
G PL P PPPPP P AP P + P PP PP G
Sbjct: 349 GSIPLPPQGRSAPPPPP-PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG 407
Query: 681 XXPPPXXPPPPXAPXPPPXPPP 746
PP P P PP PP
Sbjct: 408 NASRTSTPPVPTPPSLPPSAPP 429
Score = 40.3 bits (90), Expect = 4e-04
Identities = 26/71 (36%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Frame = +3
Query: 543 PPPPPXPXXAPPXX---FXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPPPXXPPPP 713
P PP P APP P G P PP APP P P PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI------APPLPAGMPAAPPLPP 471
Query: 714 XAPXPPPXPPP 746
AP PPP P P
Sbjct: 472 AAPAPPPAPAP 482
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +3
Query: 546 PPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAP-PPGXXPPPXXPPPPXAP 722
PPPP P P G P PP P PP P PPP AP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 723 XPPPXPPP 746
PPP
Sbjct: 371 STGRQPPP 378
Score = 33.5 bits (73), Expect = 0.043
Identities = 35/117 (29%), Positives = 37/117 (31%), Gaps = 7/117 (5%)
Frame = +3
Query: 417 PXPXGXIS---LXLXXXRPXPXRPXXRXFLFXXGPPPLXPXXXXXPPPPPXPXXAPPXXF 587
P P +S L RP P P R G PP+ PPP P PP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRR---NRGKPPIGNGSSNSSLPPPPP---PP--- 343
Query: 588 XPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPPPXXPPPP----XAPXPPPXPPP 746
R P PP PPP P PPP A PP PPP
Sbjct: 344 ----RSNAAGSIPLPPQGRSAPP---PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Frame = +3
Query: 666 APP-PGXXP---PPXXPPPPXAPXPPPXPPP 746
APP P P PP P AP PPP PPP
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 30.3 bits (65), Expect = 0.40
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXP 689
PP L PP PP APP G P PP APPP P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLP------AGMPAAPPLPPAAP-------APPPAPAP 482
Query: 690 PPXXPPPPXAPXP 728
P P A P
Sbjct: 483 APAAPVASIAELP 495
Score = 29.5 bits (63), Expect = 0.69
Identities = 20/75 (26%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +3
Query: 525 PXXXXXPP-PPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPPPXX 701
P PP PP P PP + P PP + PP P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPP---PIPPPSNGTVSSPPNSPPRPIAPVSM 280
Query: 702 PPPPXAPXPPPXPPP 746
P + PP PPP
Sbjct: 281 NPAINSTSKPPLPPP 295
Score = 29.1 bits (62), Expect = 0.92
Identities = 28/85 (32%), Positives = 28/85 (32%), Gaps = 6/85 (7%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXFXPXTRG-GXXXXXPXPPXXXXRXXNXXAPP--PG 680
PPPL PP P P A P P G PP APP P
Sbjct: 376 PPPLSSSRAVSNPPAPPP--AIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Query: 681 XXPPPXXPPPPXAPX-PP--PXPPP 746
PP P AP PP P PP
Sbjct: 434 SAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 508 ALPPXXPXXLXXPPPPPXPXXPPPXXXPPXPXG 606
+LPP P L P P P PP P G
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 508 ALPPXXPXXLXXPPPPPXPXXPPPXXXPPXP 600
ALPP PP P P PP P P
Sbjct: 402 ALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 40.3 bits (90), Expect = 4e-04
Identities = 32/85 (37%), Positives = 32/85 (37%), Gaps = 6/85 (7%)
Frame = -3
Query: 742 GGXGGGXGAXGGGGXXGGGXXPG----GGAXXXXXRXXXXGGXGXXXFXPPRV-XGXXXX 578
G GGG G GGG GG PG GG GG G P G
Sbjct: 184 GHNGGGFGGFGGGS---GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF 240
Query: 577 GGAXXGXGGG-GGX*XXXGXRGGGP 506
GG G GGG GG G GGGP
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 35.5 bits (78), Expect = 0.011
Identities = 27/80 (33%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
Frame = -3
Query: 745 GGGXGGGXGAXGGGGXXGGGXXPGGGAXXXXXRXXXXGGXGXXXFXPPRVXGXXXX-GGA 569
GG GG G G G GG GG GG G P G GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Query: 568 XXGXGGG-GGX*XXXGXRGG 512
G GGG GG G GG
Sbjct: 251 LGGFGGGPGGFGGGPGGHGG 270
Score = 29.1 bits (62), Expect = 0.92
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -3
Query: 742 GGXGGGXGAXGGG-GXXGGGXXP-GGGAXXXXXRXXXXGGXG 623
GG GG G GGG G GGG GGG GG G
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.6 bits (56), Expect = 4.9
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = -2
Query: 779 GGFSXXGGGXXGGGXGGGXRXXRGXXXXXXXXXXXXXGXXVXXAXXXXGGXXXXXXXXPX 600
GGF GGG GG G G G P
Sbjct: 188 GGFGGFGGG--SGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 599 GXGGKXXG--GGXXGXGGGGGXXXXXG 525
G GG G GG G GGG G G
Sbjct: 246 GFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 672 PPGXXPPPXXPPPPXAP-XPPPXPPPXXXXXXXGKTP 779
PPG PPP PP P PPP PPP KTP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 33.9 bits (74), Expect = 0.032
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +1
Query: 508 ALPPXXPXXLXXPPPPPXPXXPPPXXXPPXP 600
+LPP P PPPPP P PP PP P
Sbjct: 3 SLPPGNP-----PPPPPPPGFEPPSQPPPPP 28
Score = 29.9 bits (64), Expect = 0.52
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 669 PPPGXXPPPXXPPPPXAPXPPP 734
PPP PP PP P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/92 (28%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +3
Query: 507 GPPPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPX-PPXXXXRXXNXXAPPPGX 683
G PP+ P PP P P APP PP PPP
Sbjct: 1138 GAPPV-PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 684 XPPPXXPPPPXAPXPPPXPPPXXXXXXXGKTP 779
PP P P PPP P G P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 36.7 bits (81), Expect = 0.005
Identities = 23/78 (29%), Positives = 24/78 (30%)
Frame = +3
Query: 513 PPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPP 692
PP+ P PP P P P P T PP APPP P
Sbjct: 1012 PPV-PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Query: 693 PXXPPPPXAPXPPPXPPP 746
P P PP P P
Sbjct: 1071 SEIPSIPAPSGAPPVPAP 1088
Score = 33.1 bits (72), Expect = 0.056
Identities = 24/85 (28%), Positives = 25/85 (29%), Gaps = 5/85 (5%)
Frame = +3
Query: 507 GPPPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPX---PPXXXXRXXNXXAPPP 677
G PP+ PP P PP P G P PP PPP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPV---PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Query: 678 GXXPPPXXPPP--PXAPXPPPXPPP 746
PP P P P P PP
Sbjct: 1214 STAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 32.3 bits (70), Expect = 0.098
Identities = 21/78 (26%), Positives = 22/78 (28%)
Frame = +3
Query: 513 PPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPP 692
PP+ P PP P AP P P A PP P
Sbjct: 1050 PPVPKSSSGAPSAPP-PVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Query: 693 PXXPPPPXAPXPPPXPPP 746
PP P PP P P
Sbjct: 1109 VAVPPVPAPSGAPPVPKP 1126
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/80 (28%), Positives = 24/80 (30%)
Frame = +3
Query: 507 GPPPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXX 686
G PP+ P PP P P A P P P P PP
Sbjct: 1090 GIPPV-PKPSVAAPPVPKPSVAVP----PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK 1144
Query: 687 PPPXXPPPPXAPXPPPXPPP 746
P PP P PP P P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKP 1164
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/78 (26%), Positives = 23/78 (29%), Gaps = 4/78 (5%)
Frame = +3
Query: 513 PPLXPXXXXXPPPPPXPXXAPPXXFX----PXTRGGXXXXXPXPPXXXXRXXNXXAPPPG 680
PP+ P PP P P APP P + PP P P
Sbjct: 1022 PPV-PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Query: 681 XXPPPXXPPPPXAPXPPP 734
PP P P P P
Sbjct: 1081 GAPP-VPAPSGIPPVPKP 1097
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.011
Identities = 24/68 (35%), Positives = 24/68 (35%)
Frame = +3
Query: 543 PPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPPPXXPPPPXAP 722
PPPPP P P P PP AP G PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPI---------PVPPP---------APIMGGPPPPPPPPGVAGA 773
Query: 723 XPPPXPPP 746
PPP PPP
Sbjct: 774 GPPPPPPP 781
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 6/32 (18%)
Frame = +3
Query: 669 PPPGXX---PPPXXPPPPXA---PXPPPXPPP 746
PPP PPP PPP A P PPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.056
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 511 LPPXXPXXLXXPPPPPXPXXPPPXXXPPXPXGXXXXXXXXPP 636
+P P + PPP P PPP PP G PP
Sbjct: 741 VPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.3 bits (70), Expect = 0.098
Identities = 24/73 (32%), Positives = 24/73 (32%)
Frame = +3
Query: 495 LFXXGPPPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPP 674
L PPP P P P P P PP P G P PP
Sbjct: 727 LLLKSPPP-PPPAVIVPTPAPAPIPVPP----PAPIMGGPPPPPPPPGV----------- 770
Query: 675 PGXXPPPXXPPPP 713
G PPP PPPP
Sbjct: 771 AGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.098
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 669 PPPGXXPPPXXPPPPXAPXPPPXPPPXXXXXXXGKTP 779
P P P P PP P PPP PPP G P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPP-PPPPPGVAGAGPPP 777
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +3
Query: 513 PPLXPXXXXXPPPPPXPXXAPPXXFXPXTRG-GXXXXXPXPPXXXXRXXNXXAPPPGXXP 689
P P PPP P PP P G G P PP AP P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Query: 690 PP 695
P
Sbjct: 802 EP 803
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +3
Query: 417 PXPXGXISLXLXXXRPXPXRPXXRXFLFXXGPPPLXPXXXXXPPPPPXPXXA 572
P P + + P P P PPP PPPPP P A
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 7/48 (14%)
Frame = +1
Query: 514 PPXXPXXLXXPPPPPXPXXPPP-------XXXPPXPXGXXXXXXXXPP 636
PP P + P P P P PP PP P G PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.032
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 669 PPPGXXPPPXXPPPPXAPXPPPXPPPXXXXXXXGKTPN 782
PPP PPP PP A PP PPP PN
Sbjct: 1709 PPPMSVPPPPSAPPMPA-GPPSAPPPPLPASSAPSVPN 1745
Score = 32.3 bits (70), Expect = 0.098
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +3
Query: 552 PPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPPPXXPPPP-XAPXP 728
P P PP P + P PP + PP PP PPPP A
Sbjct: 1683 PAHPVSTPPVR--PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSA 1740
Query: 729 PPXPPP 746
P P P
Sbjct: 1741 PSVPNP 1746
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 526 PXXLXXPPPPPXP-XXPPPXXXPPXPXG 606
P + P PPP P PPP PP P G
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAG 1726
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 514 PPXXPXXLXXPPP-PPXPXXPPPXXXPPXP 600
PP P + PP PP P PP PP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPXP 632
P P P PPP P PP P G P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Frame = +3
Query: 510 PPPLXPXXXXXPP---PPPXPXXAPPXXFXPXTR 602
PPP P PP PPP P + P P R
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.032
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 6/74 (8%)
Frame = +3
Query: 543 PPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPP-PGXXPPPXXP----- 704
PP P P P P T P P APP P PPP P
Sbjct: 124 PPSAPAPP-TPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 705 PPPXAPXPPPXPPP 746
PP AP P PP
Sbjct: 183 SPPSAPSLPSAVPP 196
Score = 29.5 bits (63), Expect = 0.69
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXP 689
PP P PPP P P P P P +PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK--------SPPSAPSL 190
Query: 690 PPXXPP-PPXAPXPPPXPPP 746
P PP PP P PP P
Sbjct: 191 PSAVPPMPPKVPPPPLSQAP 210
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 666 APPPGXXPPPXXPPPPXAPXPP 731
APPP PPP P AP PP
Sbjct: 4 APPP---PPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 514 PPXXPXXLXXPPPPPXPXXPPPXXXPPXP 600
P P PPP P P P PP P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 32.3 bits (70), Expect = 0.098
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXF-XPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXX 686
PPP+ PPPP P P P PP + PP
Sbjct: 209 PPPMHHKPGEHMPPPPM-HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 687 PPPXXPPPPXAPXPPPXPPP 746
P PPPP P PP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPP 287
Score = 32.3 bits (70), Expect = 0.098
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXF-XPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXX 686
PPP+ PPPP P P P PP + PP
Sbjct: 222 PPPMHHEPGEHMPPPPM-HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 687 PPPXXPPPPXAPXPPPXPPP 746
P PPPP P PP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPP 300
Score = 32.3 bits (70), Expect = 0.098
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXF-XPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXX 686
PPP+ PPPP P P P PP + PP
Sbjct: 235 PPPMHHEPGEHMPPPPM-HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 687 PPPXXPPPPXAPXPPPXPPP 746
P PPPP P PP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPP 313
Score = 32.3 bits (70), Expect = 0.098
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXF-XPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXX 686
PPP+ PPPP P P P PP + PP
Sbjct: 248 PPPMHHEPGEHMPPPPM-HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 306
Query: 687 PPPXXPPPPXAPXPPPXPPP 746
P PPPP P PP
Sbjct: 307 PGEHMPPPPMHHEPGEHMPP 326
Score = 32.3 bits (70), Expect = 0.098
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXF-XPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXX 686
PPP+ PPPP P P P PP + PP
Sbjct: 261 PPPMHHEPGEHMPPPPM-HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 319
Query: 687 PPPXXPPPPXAPXPPPXPPP 746
P PPPP P PP
Sbjct: 320 PGEHMPPPPMHHEPGEHMPP 339
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXP 689
PPP+ PPPP P P PP + PP P
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Query: 690 PPXXPPPP 713
PPPP
Sbjct: 334 GEHMPPPP 341
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/67 (26%), Positives = 19/67 (28%), Gaps = 1/67 (1%)
Frame = +3
Query: 549 PPPXPXXAPPXXF-XPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPPPXXPPPPXAPX 725
PPP P P P PP + PP P PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 726 PPPXPPP 746
P PP
Sbjct: 268 PGEHMPP 274
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.098
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 742 GGXGGGXGAXGGGGXXGGGXXPGGGAXXXXXRXXXXGGXG 623
GG GGG G GGG G GG R GG G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 30.3 bits (65), Expect = 0.40
Identities = 25/68 (36%), Positives = 26/68 (38%)
Frame = -3
Query: 745 GGGXGGGXGAXGGGGXXGGGXXPGGGAXXXXXRXXXXGGXGXXXFXPPRVXGXXXXGGAX 566
GG GG G GG G GGG GGA R GG G R GG+
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGR---GGA-RGGGRGGARGGRGG------RGGARGGRGGSS 61
Query: 565 XGXGGGGG 542
G GG G
Sbjct: 62 GGRGGAKG 69
Score = 29.9 bits (64), Expect = 0.52
Identities = 24/77 (31%), Positives = 26/77 (33%)
Frame = -3
Query: 742 GGXGGGXGAXGGGGXXGGGXXPGGGAXXXXXRXXXXGGXGXXXFXPPRVXGXXXXGGAXX 563
G GG G+ GG G GG GG G G G GGA
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG----------GRGGRGGARG 55
Query: 562 GXGGGGGX*XXXGXRGG 512
G GG G G +GG
Sbjct: 56 GRGGSSG--GRGGAKGG 70
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 593 GGKXXGGGXXGXGGGGGXXXXXGXKGGR 510
GG+ GG G GGG G +GGR
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGR 50
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -2
Query: 779 GGFSXXGGGXXGGGXGG--GXRXXRG 708
GGF GG GGG GG G R RG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 25.4 bits (53), Expect(2) = 0.23
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = -2
Query: 599 GXGGKXXGGGXXGXGG-GGGXXXXXGXKGGRAXXK 498
G G GG G GG GG G GGR K
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 24.2 bits (50), Expect(2) = 0.23
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 779 GGFSXXGGGXXGGGXGGGXRXXRG 708
GGF+ GG GGG GG RG
Sbjct: 19 GGFNGGRGGF-GGGRGGARGGGRG 41
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 745 GGGXGGGXGAXGGGGXXGGGXXPGGG 668
GGG GG G GG G GG GGG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG 471
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 779 GGFSXXGGGXXGGGXGGGXRXXRG 708
GGF GG GG GGG RG
Sbjct: 454 GGFGGRGGFGGRGGFGGGRGRGRG 477
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +3
Query: 666 APPPGXXPPPXXPPPPXAP---XPPPXPPP 746
+PPP PP P P PPP PPP
Sbjct: 166 SPPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 672 PPGXXPPPXXPPPPXAPXPPPXPPP 746
PP P P P PPP PPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +3
Query: 543 PPPPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPPPXXPPPPXAP 722
PPPPP P PP P R + PP P P P P
Sbjct: 189 PPPPPPP---PPAVEDQAADANE----PDDYYSSGRAVSPEIPPT-YTPKQADPLPAPPP 240
Query: 723 XPPPXPPP 746
PPP PP
Sbjct: 241 PPPPTLPP 248
Score = 27.9 bits (59), Expect = 2.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 702 PPPPXAPXPPPXPP 743
PPPP P PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 517 PXXPXXLXXPPPPPXPXXPP 576
P L PPPPP P PP
Sbjct: 229 PKQADPLPAPPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 4.9
Identities = 23/96 (23%), Positives = 26/96 (27%), Gaps = 5/96 (5%)
Frame = +3
Query: 510 PPPLXPXXXXXPPPPPXPXX-----APPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPP 674
P P PPPPP P A G PP + + P
Sbjct: 179 PATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAP 238
Query: 675 PGXXPPPXXPPPPXAPXPPPXPPPXXXXXXXGKTPN 782
P PPP PP + P P G N
Sbjct: 239 P---PPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVN 271
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 669 PPPGXXPPPXXPPPPXAPXPPPXPP 743
PP P P P PPP PP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 711 PXAPXPPPXPPP 746
P P PPP PPP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 22.2 bits (45), Expect(2) = 1.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 726 PPPXPPPXXXXXXXGK 773
PPP PPP GK
Sbjct: 946 PPPPPPPPLVSAAGGK 961
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = -3
Query: 742 GGXGGGXGAXGG---GGXXGGGXXPGGGAXXXXXRXXXXGG 629
GG GG G GG GG GG GG R GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -2
Query: 635 GGXXXXXXXXPXGXGGKXXGGGXXGXGGGGGXXXXXGXKGG 513
GG G GG GG G GG G G +GG
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.9 bits (59), Expect = 2.1
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = -3
Query: 739 GXGGGXGAXGGGGXXGGGXXPGGGAXXXXXRXXXXGGXGXXXFXPPRVXGXXXXGGAXXG 560
G GG GA G GG G G GGA GG P G A G
Sbjct: 80 GAEGGPGA-GFGGFPGAGP---GGARTFHFNMGGPGGAQFFSASDPNDIFERVFGHAFAG 135
Query: 559 XGGGGG 542
GG GG
Sbjct: 136 GGGMGG 141
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 693 PXXPPPPXAPXPPPXPP 743
P PPP AP PPP PP
Sbjct: 802 PFKAPPP-APLPPPAPP 817
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 733 GGGXGAXGGGGXXGGGXXPGGGA 665
GGG G G GG G G GGA
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGGA 247
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 779 GGFSXXGGGXXGGGXGGGXR 720
GGF GGG GG G G R
Sbjct: 124 GGFGGRGGGRMGGRGGRGRR 143
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.5
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +3
Query: 549 PPPXPXXAPPXXFXPXTRGGXXXXXPXPPXXXXRXXNXXAPPPGXXPPPXXPPPPXAPXP 728
PP P PP P P P AP PG P P P A P
Sbjct: 500 PPGVPL--PPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAP 557
Query: 729 PPXP 740
P P
Sbjct: 558 PGAP 561
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,611,763
Number of Sequences: 5004
Number of extensions: 25538
Number of successful extensions: 694
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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