Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C12
(940 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical pr... 30 2.1
L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.1
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.3
U23486-1|AAL38956.1| 265|Caenorhabditis elegans Hypothetical pr... 29 6.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.3
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 28 8.4
>L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical
protein ZC262.5 protein.
Length = 54
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 130 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 243
AAG+ +SQI A V QCTK A K P +A L+T
Sbjct: 6 AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical
protein R05D3.6 protein.
Length = 54
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 130 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 243
AAG+ +SQI A V QCTK A K P +A L+T
Sbjct: 6 AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = -2
Query: 864 GEGXXXXXRXKEGPXGGXXGFXLGXNXGXGKGXGFXRXGAXSGXSAHGLRGVXWGXVXG 688
G G GP G G G N G G+G G R G G + + G + G
Sbjct: 135 GRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAGERIAEGVLGALLG 193
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -2
Query: 864 GEGXXXXXRXKEGPXGGXXGFXLGXNXGXGKGXGFXRXGAXSGXSAHGLRGVXWGXVXGG 685
G+G + GG G G N G G+G G G G G +G G GG
Sbjct: 131 GQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRG-GSGGQGGWGGSQDGGSQGGWGGQNGGG 189
Query: 684 XXHDTGG 664
+ GG
Sbjct: 190 QGGNQGG 196
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 689 PXTXPHXTPRKPWAXXPDXAPSRXXPXPLPXPXXLPKXKPXXPPXGPS 832
P P P P P AP + P P P P P P PP P+
Sbjct: 108 PAPAPPPAPY-PQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPA 154
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +2
Query: 665 PPVS*XXPPXTXPHXT-PRKPWAXXPDXAPSRXXPXPLPXPXXLPKXKPXXPPXGPS 832
PP P P + P P P PS P P P P +P PP P+
Sbjct: 209 PPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPT 265
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +2
Query: 665 PPVS*XXPPXTXPHXTPRKPWAXXPDXAPSRXXPXPLPXPXXLPKXKPXXPPXGPSFXR* 844
PP PP P P P P P P P P P PP PS+
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPC 87
Query: 845 XXXXPSP 865
P+P
Sbjct: 88 QSYAPAP 94
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 695 TXPHXTPRKPWAXXPDXAPSRXXPXPLPXPXXLPKXKPXXPPXGP 829
T P TP KP P P+ P P P P + K P PP P
Sbjct: 457 TTPPTTP-KPAPPPPSRIPN---PSPSPQPAEVSKSPPPPPPLPP 497
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 6/60 (10%)
Frame = +2
Query: 665 PPVS*XXPPXTXPHXTPRKPWAXXPDXAP------SRXXPXPLPXPXXLPKXKPXXPPXG 826
PP++ PP P P P P S P P P P P P PP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 6/60 (10%)
Frame = +2
Query: 665 PPVS*XXPPXTXPHXTPRKPWAXXPDXAP------SRXXPXPLPXPXXLPKXKPXXPPXG 826
PP++ PP P P P P S P P P P P P PP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U23486-1|AAL38956.1| 265|Caenorhabditis elegans Hypothetical
protein F07F6.7 protein.
Length = 265
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +1
Query: 133 AGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLV-DLNVLKTEIEEAK 309
AG++ S ++ V T K + K+ E+ L + L+ N L E+
Sbjct: 91 AGLIVGAASGVSNVATGVNKKLATDHKIREINRMLAEDAKFFEELLHSRNDLLNEVRRFV 150
Query: 310 PNGALXEVFKKYCDKSAHLKGCISSVLXGV 399
+ ++FK + D +HLK L G+
Sbjct: 151 EDKQSSKIFKNFDDVQSHLKTLFGVSLAGI 180
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 695 TXPHXTPRKPWAXXPDXAPSRXXPXPLPXPXXLPKXKPXXPPXGP 829
T P TP KP P P+ P P P P + K P PP P
Sbjct: 464 TTPPTTP-KPAPPPPSRIPN---PSPSPQPAEVSKSPPPPPPLPP 504
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 6/60 (10%)
Frame = +2
Query: 665 PPVS*XXPPXTXPHXTPRKPWAXXPDXAP------SRXXPXPLPXPXXLPKXKPXXPPXG 826
PP++ PP P P P P S P P P P P P PP G
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/67 (32%), Positives = 25/67 (37%)
Frame = +2
Query: 665 PPVS*XXPPXTXPHXTPRKPWAXXPDXAPSRXXPXPLPXPXXLPKXKPXXPPXGPSFXR* 844
PP S PP P P +P P A S P P LP+ P P PS +
Sbjct: 92 PPPS--DPPPPPPPVAPHQP---PPQLATSAQPPQPPVINSQLPRMSP-APAIPPSMAQP 145
Query: 845 XXXXPSP 865
PSP
Sbjct: 146 LLQSPSP 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,791,358
Number of Sequences: 27780
Number of extensions: 327926
Number of successful extensions: 1101
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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