Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C11
(921 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 180 9e-45
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 179 1e-44
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 179 1e-44
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 179 1e-44
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 179 1e-44
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 179 1e-44
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 179 1e-44
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 179 1e-44
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 70 1e-11
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 180 bits (437), Expect = 9e-45
Identities = 89/123 (72%), Positives = 100/123 (81%)
Frame = +2
Query: 98 AGAKFPYLPGSPSGSSNQLRRQHRXQRICM*SLSKGIKGRLNRLPAAGSGDMIVATVKKG 277
+GAKF G P G+ + + + S+ KGIKGRLNRLPAAG GDM++ATVKKG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKG 68
Query: 278 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 457
KPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADL
Sbjct: 69 KPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 128
Query: 458 WPR 466
WPR
Sbjct: 129 WPR 131
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 179 bits (436), Expect = 1e-44
Identities = 89/123 (72%), Positives = 100/123 (81%)
Frame = +2
Query: 98 AGAKFPYLPGSPSGSSNQLRRQHRXQRICM*SLSKGIKGRLNRLPAAGSGDMIVATVKKG 277
+GAKF G P G+ + + + S+ KGIKGRLNRLPAAG GDM++ATVKKG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKG 68
Query: 278 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 457
KPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADL
Sbjct: 69 KPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 128
Query: 458 WPR 466
WPR
Sbjct: 129 WPR 131
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 179 bits (436), Expect = 1e-44
Identities = 89/123 (72%), Positives = 100/123 (81%)
Frame = +2
Query: 98 AGAKFPYLPGSPSGSSNQLRRQHRXQRICM*SLSKGIKGRLNRLPAAGSGDMIVATVKKG 277
+GAKF G P G+ + + + S+ KGIKGRLNRLPAAG GDM++ATVKKG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKG 68
Query: 278 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 457
KPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADL
Sbjct: 69 KPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 128
Query: 458 WPR 466
WPR
Sbjct: 129 WPR 131
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 179 bits (436), Expect = 1e-44
Identities = 89/123 (72%), Positives = 100/123 (81%)
Frame = +2
Query: 98 AGAKFPYLPGSPSGSSNQLRRQHRXQRICM*SLSKGIKGRLNRLPAAGSGDMIVATVKKG 277
+GAKF G P G+ + + + S+ KGIKGRLNRLPAAG GDM++ATVKKG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKG 68
Query: 278 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 457
KPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADL
Sbjct: 69 KPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 128
Query: 458 WPR 466
WPR
Sbjct: 129 WPR 131
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 179 bits (436), Expect = 1e-44
Identities = 89/123 (72%), Positives = 100/123 (81%)
Frame = +2
Query: 98 AGAKFPYLPGSPSGSSNQLRRQHRXQRICM*SLSKGIKGRLNRLPAAGSGDMIVATVKKG 277
+GAKF G P G+ + + + S+ KGIKGRLNRLPAAG GDM++ATVKKG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKG 68
Query: 278 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 457
KPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADL
Sbjct: 69 KPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 128
Query: 458 WPR 466
WPR
Sbjct: 129 WPR 131
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 179 bits (436), Expect = 1e-44
Identities = 89/123 (72%), Positives = 100/123 (81%)
Frame = +2
Query: 98 AGAKFPYLPGSPSGSSNQLRRQHRXQRICM*SLSKGIKGRLNRLPAAGSGDMIVATVKKG 277
+GAKF G P G+ + + + S+ KGIKGRLNRLPAAG GDM++ATVKKG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKG 68
Query: 278 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 457
KPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADL
Sbjct: 69 KPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 128
Query: 458 WPR 466
WPR
Sbjct: 129 WPR 131
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 179 bits (436), Expect = 1e-44
Identities = 89/123 (72%), Positives = 100/123 (81%)
Frame = +2
Query: 98 AGAKFPYLPGSPSGSSNQLRRQHRXQRICM*SLSKGIKGRLNRLPAAGSGDMIVATVKKG 277
+GAKF G P G+ + + + S+ KGIKGRLNRLPAAG GDM++ATVKKG
Sbjct: 4 SGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKG 62
Query: 278 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 457
KPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADL
Sbjct: 63 KPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 122
Query: 458 WPR 466
WPR
Sbjct: 123 WPR 125
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 179 bits (436), Expect = 1e-44
Identities = 89/123 (72%), Positives = 100/123 (81%)
Frame = +2
Query: 98 AGAKFPYLPGSPSGSSNQLRRQHRXQRICM*SLSKGIKGRLNRLPAAGSGDMIVATVKKG 277
+GAKF G P G+ + + + S+ KGIKGRLNRLPAAG GDM++ATVKKG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKG 68
Query: 278 KPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 457
KPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADL
Sbjct: 69 KPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 128
Query: 458 WPR 466
WPR
Sbjct: 129 WPR 131
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 69.7 bits (163), Expect = 1e-11
Identities = 38/67 (56%), Positives = 46/67 (68%)
Frame = +2
Query: 98 AGAKFPYLPGSPSGSSNQLRRQHRXQRICM*SLSKGIKGRLNRLPAAGSGDMIVATVKKG 277
+GAKF G P G+ + + + S+ KGIKGRLNRLPAAG GDM++ATVKKG
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATVKKG 68
Query: 278 KPELRKK 298
KPELRKK
Sbjct: 69 KPELRKK 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,416,450
Number of Sequences: 237096
Number of extensions: 2307441
Number of successful extensions: 4577
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4559
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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