Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C10
(927 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8; Bilater... 128 3e-28
UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10; Euther... 126 8e-28
UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1; ... 122 1e-26
UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42; Coelom... 121 3e-26
UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8; Metazoa... 112 1e-23
UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28; Fungi/... 103 9e-21
UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17; Dikary... 96 1e-18
UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7; Eukaryo... 89 2e-16
UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11; Euka... 84 6e-15
UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4; Arabi... 77 9e-13
UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago t... 75 2e-12
UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|R... 73 8e-12
UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14; Eukary... 73 1e-11
UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8; Eukaryo... 71 3e-11
UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lambl... 71 6e-11
UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S riboso... 69 1e-10
UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Ho... 69 2e-10
UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=... 69 2e-10
UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whol... 59 2e-07
UniRef50_UPI0000499913 Cluster: 40S ribosomal protein S21; n=1; ... 57 6e-07
UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133, w... 53 9e-06
UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillar... 53 1e-05
UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa di... 51 4e-05
UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1; Ostre... 50 1e-04
>UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8;
Bilateria|Rep: 40S ribosomal protein S21 - Homo sapiens
(Human)
Length = 83
Score = 128 bits (308), Expect = 3e-28
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 355 RMGESDDCIVRLTKKDGILAKNY 423
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10;
Eutheria|Rep: 40S ribosomal protein S21 - Mus musculus
(Mouse)
Length = 83
Score = 126 bits (304), Expect = 8e-28
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR 60
Query: 355 RMGESDDCIVRLTKKDGILAKNY 423
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 95
Score = 122 bits (295), Expect = 1e-26
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = +1
Query: 178 QNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRR 357
+NDAG FVDLYCPRKCS+S R+IHAKDHA +Q+ I DV+P TGR +TS +Y +C IRR
Sbjct: 14 KNDAGGFVDLYCPRKCSSSKRIIHAKDHALIQINIVDVNPVTGRMLETSTVYAICDVIRR 73
Query: 358 MGESDDCIVRLTKKDGILAKN 420
+GESDDCIVRL KK+ ++KN
Sbjct: 74 LGESDDCIVRLAKKNLKISKN 94
>UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42;
Coelomata|Rep: 40S ribosomal protein S21 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 81
Score = 121 bits (291), Expect = 3e-26
Identities = 56/81 (69%), Positives = 65/81 (80%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ IA+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINIAEVDRVTGRFNGQFKTYAICGAIR 60
Query: 355 RMGESDDCIVRLTKKDGILAK 417
RMGE+DD ++RL K D I+AK
Sbjct: 61 RMGEADDSLLRLAKTDSIVAK 81
>UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8;
Metazoa|Rep: 40S ribosomal protein S21 - Caenorhabditis
elegans
Length = 88
Score = 112 bits (269), Expect = 1e-23
Identities = 52/83 (62%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR-AADTSKMYVVCGAI 351
MQNDAG+ V+LY PRKCS+SNR+I KDHASVQ+ DVDP TGR S Y +CGAI
Sbjct: 1 MQNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAI 60
Query: 352 RRMGESDDCIVRLTKKDGILAKN 420
RRMGESDD I+RL +KDG++ ++
Sbjct: 61 RRMGESDDAILRLAQKDGLVPRD 83
>UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28;
Fungi/Metazoa group|Rep: 40S ribosomal protein S21 -
Botryotinia fuckeliana B05.10
Length = 88
Score = 103 bits (246), Expect = 9e-21
Identities = 48/79 (60%), Positives = 60/79 (75%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
M+ND GE VDLY PRKCSA+NR+I AKDH SVQ+ IA VD GRA +++Y +CG IR
Sbjct: 1 MENDKGELVDLYVPRKCSATNRIIKAKDHGSVQISIAKVD-ENGRATGENQVYALCGFIR 59
Query: 355 RMGESDDCIVRLTKKDGIL 411
MGESDD + RL ++DG+L
Sbjct: 60 AMGESDDSLNRLAQRDGLL 78
>UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17;
Dikarya|Rep: 40S ribosomal protein S21 -
Schizosaccharomyces pombe (Fission yeast)
Length = 87
Score = 95.9 bits (228), Expect = 1e-18
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK-MYVVCGAI 351
M+N+AG+ VDLY PRKCSA+NR+I AKDHASVQ+ + VD A GR K Y + G +
Sbjct: 1 MENEAGQLVDLYVPRKCSATNRIIQAKDHASVQINVCAVD-AEGRQIPGEKTTYAISGFV 59
Query: 352 RRMGESDDCIVRLTKKDGIL 411
R GESDDCI RLT +DG+L
Sbjct: 60 RSKGESDDCINRLTTQDGLL 79
>UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7;
Eukaryota|Rep: 40S ribosomal protein S21 - Cyanophora
paradoxa
Length = 82
Score = 88.6 bits (210), Expect = 2e-16
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
MQND G+ VDLY PRKCSA+NRLI A DHA+VQ+ + VDP +G + +CG +R
Sbjct: 1 MQNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVR 60
Query: 355 RMGESDDCIVRLTKKDGI 408
MGESD + RL K G+
Sbjct: 61 SMGESDAALNRLCVKHGL 78
>UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11;
Eukaryota|Rep: 40S ribosomal protein S21-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 87
Score = 83.8 bits (198), Expect = 6e-15
Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKM-YVVCGAI 351
M+ND G+ V+LY PRKCSA+NR+I A DHASVQ+ +A VD GRA + Y + G +
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVD-EEGRAIPGEYVTYALSGYV 59
Query: 352 RRMGESDDCIVRLTKKDGIL 411
R GESDD + RL + DG+L
Sbjct: 60 RSRGESDDSLNRLAQNDGLL 79
>UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4;
Arabidopsis thaliana|Rep: 40S ribosomal protein S21-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 76.6 bits (180), Expect = 9e-13
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
MQN+ G+ +LY PRKCSA+NRLI +KDHASVQL I +D A G + +CG +R
Sbjct: 1 MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLD-ANGLYTGQFTTFALCGFVR 59
Query: 355 RMGESDDCIVRLTKKDGILAK 417
G++D + RL +K + AK
Sbjct: 60 AQGDADSGVDRLWQKKKVEAK 80
>UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago
truncatula|Rep: Ribosomal protein S21e - Medicago
truncatula (Barrel medic)
Length = 106
Score = 75.4 bits (177), Expect = 2e-12
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = +1
Query: 163 QTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVC 342
+T KMQN+ G+ +LY PRKCSA+NRLI AKDHASVQ+ + +D +G + +C
Sbjct: 22 ETLKMQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLD-ESGVYNGQFSTFALC 80
Query: 343 GAIRRMGESDDCIVRLTKK 399
G R G++D I RL +K
Sbjct: 81 GFTRAQGDADSGIDRLWQK 99
>UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|Rep:
Ribosomal protein S21 - Homo sapiens (Human)
Length = 66
Score = 73.3 bits (172), Expect = 8e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 309
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14;
Eukaryota|Rep: 40S ribosomal protein S21 - Oryza sativa
subsp. japonica (Rice)
Length = 82
Score = 72.9 bits (171), Expect = 1e-11
Identities = 37/75 (49%), Positives = 48/75 (64%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I VD G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59
Query: 355 RMGESDDCIVRLTKK 399
G++D + RL +K
Sbjct: 60 AQGDADSALDRLWQK 74
>UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8;
Eukaryota|Rep: 40S ribosomal protein S21 - Zea mays
(Maize)
Length = 81
Score = 71.3 bits (167), Expect = 3e-11
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I +D A G + + G +R
Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLD-ANGLYDGHFTTFALSGFVR 59
Query: 355 RMGESDDCIVRLTKK 399
G++D + RL +K
Sbjct: 60 AQGDADSSLDRLWQK 74
>UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_72066_72335 - Giardia lamblia
ATCC 50803
Length = 89
Score = 70.5 bits (165), Expect = 6e-11
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
M+N +G VD Y PRKCSA+NRLI KDHA+VQL +A V+ + + CGAIR
Sbjct: 8 MKNSSGVVVDAYIPRKCSATNRLIGPKDHAAVQLSVARVNDKGKMIENNYVTFAFCGAIR 67
Query: 355 RMGESDDCIVRLTKKDGILAK 417
G D + L ++ G++ +
Sbjct: 68 SRGGVDSAFMLLAQEHGLMER 88
>UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S ribosomal
protein S21; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S21 - Rattus norvegicus
Length = 326
Score = 69.3 bits (162), Expect = 1e-10
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATG 306
+QNDAGEFVDLY PRKCS+SN +I KDH S+QL +A VD +TG
Sbjct: 261 VQNDAGEFVDLYVPRKCSSSNHIITVKDHTSIQLNVAKVDRSTG 304
>UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Homo
sapiens|Rep: 8.2 kDa differentiation factor - Homo
sapiens (Human)
Length = 97
Score = 68.9 bits (161), Expect = 2e-10
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 285
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
>UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=4;
Trypanosoma cruzi|Rep: 40S ribosomal protein S21,
putative - Trypanosoma cruzi
Length = 251
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +1
Query: 160 LQTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVV 339
+ T N+ G VDLY PRKC A+N LI + DH++VQ+ IA+VD A G T+ + +
Sbjct: 1 MTTIGTYNEEGVNVDLYIPRKCHATNNLITSYDHSAVQIAIANVD-ANGVLNGTTTTFCI 59
Query: 340 CGAIRRMGESDDCIVRLTKKDGIL 411
G +RR ESD I L GI+
Sbjct: 60 AGYLRRQAESDHAINHLAISKGII 83
>UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whole
genome shotgun sequence; n=2; Deuterostomia|Rep:
Chromosome undetermined SCAF15610, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 51
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = +1
Query: 274 LVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAK 417
L + VD TGR K Y +CGAIRRMGESDD I+RL K D ++AK
Sbjct: 4 LHLPQVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKNDSVIAK 51
>UniRef50_UPI0000499913 Cluster: 40S ribosomal protein S21; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S21 - Entamoeba histolytica HM-1:IMSS
Length = 86
Score = 57.2 bits (132), Expect = 6e-07
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +1
Query: 199 VDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDC 378
++LY PR CS ++ LI A DHA+VQ+++ V+ G S +Y V G++R+ G SD
Sbjct: 7 IELYIPRHCSVTHTLIAADDHAAVQILVPHVN-ENGVILPESTVYTVKGSVRKDGISDHS 65
Query: 379 IVRLTKKDGIL 411
+ R +KDG L
Sbjct: 66 LNRQFQKDGFL 76
>UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 53.2 bits (122), Expect = 9e-06
Identities = 27/93 (29%), Positives = 53/93 (56%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
M ND + VD+Y PRKC +N ++++ D++SVQ+ + VD G + ++ G +R
Sbjct: 1 MINDEKQVVDIYVPRKCQYTNMILNSSDYSSVQINVGQVD-ENGVYNKKNNTVILAGYLR 59
Query: 355 RMGESDDCIVRLTKKDGILAKNY*HLVHQTTIL 453
+ G+S + + ++ G+ + HL ++T I+
Sbjct: 60 QKGQSAAALEAILRQRGV----FYHLHNETNII 88
>UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillardia
theta|Rep: 40S ribosomal protein S21 - Guillardia theta
(Cryptomonas phi)
Length = 82
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/75 (38%), Positives = 42/75 (56%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
M + + V Y PRKCS SN+LI+ KDHAS+Q+ I +D ++ G +R
Sbjct: 1 MNSTNKKIVGEYIPRKCSLSNKLINNKDHASIQISIGVLD-KNDLFKGEYDIFAFSGLMR 59
Query: 355 RMGESDDCIVRLTKK 399
+ G+SD IV L +K
Sbjct: 60 KKGKSDYAIVNLIEK 74
>UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa
differentiation factor, partial; n=1; Pan
troglodytes|Rep: PREDICTED: similar to 8.2 kDa
differentiation factor, partial - Pan troglodytes
Length = 60
Score = 51.2 bits (117), Expect = 4e-05
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +1
Query: 181 NDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 285
N+A EFVDLY PRKCS S+ +I AKDH S+Q+ +A
Sbjct: 1 NNASEFVDLYIPRKCSTSHHVIGAKDHTSMQMNMA 35
>UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S21-maize -
Ostreococcus tauri
Length = 101
Score = 49.6 bits (113), Expect = 1e-04
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = +1
Query: 175 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 354
M N GE VDLY PRKCS +NRLI A D ASVQL + +D A G + + G +R
Sbjct: 29 MINADGENVDLYIPRKCSWTNRLITATDKASVQLNVGHLD-ANGVYSGQYTTLALAGYVR 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,506,590
Number of Sequences: 1657284
Number of extensions: 12838075
Number of successful extensions: 26460
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 25577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26450
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -