Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_C09
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601...    29   4.9  
01_01_0401 + 3043634-3043894,3045610-3045849                           29   4.9  
03_05_0373 + 23581812-23583293                                         29   6.5  
03_06_0122 - 31815023-31816357                                         28   8.6  
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856...    28   8.6  

>11_01_0727 -
           6010537-6010548,6011029-6011606,6011709-6011774,
           6011867-6011964,6013238-6013608
          Length = 374

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 81  PPHSVSRQYIMAAKFVVLFACIALAQGSDGATR 179
           PPH VSR ++ AA F    A  A A+G D   R
Sbjct: 41  PPHQVSRPWLPAAGFRSSAAASAAARGDDYGRR 73


>01_01_0401 + 3043634-3043894,3045610-3045849
          Length = 166

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
 Frame = -2

Query: 447 PCGAPRPCARCSASTVP----KP---PCPCRSRLRALPWRLLAKALSCCSTDSEPSFQAL 289
           P  +P   A+C A  VP    +P   P P R    +     L +    CS+D E SF+A 
Sbjct: 34  PPPSPPEAAKCCADGVPVVMGEPLGAPAPPRESWNSGVLSCLGRNDEFCSSDVEGSFEAF 93

Query: 288 LKSC 277
            K C
Sbjct: 94  TKQC 97


>03_05_0373 + 23581812-23583293
          Length = 493

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 474 WRSSRRQGGPCGAPRPCARCSASTVPKPP 388
           W+++   GG   A    +RCSAST PK P
Sbjct: 49  WQTNDGAGGYGSAASSPSRCSASTPPKSP 77


>03_06_0122 - 31815023-31816357
          Length = 444

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -2

Query: 429 PCARCSASTVPKP-PCPCRSRLRALPWRLLAKAL 331
           P A   A   P   PC C+ RL  +PW++ A  L
Sbjct: 23  PAAGAGAGVHPSTAPCYCKIRLGRMPWQVAAAPL 56


>03_03_0038 +
           13984525-13984917,13985351-13985429,13985535-13985628,
           13985712-13985844
          Length = 232

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 399 PKPPCPCRSRL-RALPWRLLAKALSCCSTDSEPSF 298
           P PP P + +  R + W+  A   +CC  D  P F
Sbjct: 82  PPPPPPKQEKAKRVVRWKCAAGCGACCKLDKGPDF 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,657,834
Number of Sequences: 37544
Number of extensions: 304557
Number of successful extensions: 1280
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)