Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_C07
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   4.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   4.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 760 PPPPPPP 780
           PPPPPPP
Sbjct: 731 PPPPPPP 737



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 763 PPPPPPSXXXXF 798
           PPPPPP     F
Sbjct: 731 PPPPPPPRVESF 742


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/42 (26%), Positives = 13/42 (30%)
 Frame = +3

Query: 735 HXXNNXXXXPPPPPPLXXXXXXXKXXTXPPPXPPRXXPPXXP 860
           H  +N    P P P L            P P  P+  P   P
Sbjct: 179 HVMHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFP 220


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/42 (26%), Positives = 13/42 (30%)
 Frame = +3

Query: 735 HXXNNXXXXPPPPPPLXXXXXXXKXXTXPPPXPPRXXPPXXP 860
           H  +N    P P P L            P P  P+  P   P
Sbjct: 179 HVMHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFP 220


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 33  GKFLKEFGFFNFLXKCGF 86
           GK+  E GF +F   C F
Sbjct: 788 GKYTAEAGFMSFYEICDF 805


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,878
Number of Sequences: 336
Number of extensions: 2676
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)