Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C07
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.004
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.041
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.041
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 0.070
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.29
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 24 1.6
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 2.6
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.7
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.7 bits (81), Expect = 0.004
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 819 PPPXPPRXXPPXXPPPXPPXXQKKK 893
PPP PP PP PPP PP KK
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 760 PPPPPPPSXXXXFXXKXPXXPPPXP 834
PPPPPPP + P PPP P
Sbjct: 9 PPPPPPPP-----GFEPPSQPPPPP 28
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 763 PPPPPPSXXXXFXXKXPXXPPP 828
PPPPPP + P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +3
Query: 762 PPPPPPLXXXXXXXKXXTXPPPXPPRXXPPXXPPPXPP 875
PPPPP + PPP P PP PPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPP--PPPPPP 768
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 765 PPPPPLXXXXXXXKXXTXPPPXPPRXXPPXXPPPXPP 875
P P P+ PPP PP PPP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.9 bits (64), Expect = 0.51
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 760 PPPPPPPSXXXXFXXKXPXXPPP 828
PPPPPPP P PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.67
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 637 PXXXXPPXXXPPPKPXXGGGGXXFFFLXXPXXXTKXTTXXXPPPPPPP 780
P P PPP P GG P PPPPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGG--------PPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 0.89
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 714 PPXPXXXHXXNNXXXXPPPPPPLXXXXXXXKXXTXPPPXPPRXXPPXXPPPXPP 875
PP P P P PP PPP PP PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPP----PAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 760 PPPPPPPSXXXXFXXKXPXXPPPXPRA 840
PPPPPPP P PPP P A
Sbjct: 762 PPPPPPPGVAGA----GPPPPPPPPPA 784
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 760 PPPPPPPSXXXXFXXKXPXXPPPXPRAXXPPXPXP 864
P P P P P PPP PP P P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 766 PPPPPSXXXXFXXKXPXXPPPXP 834
PPPPP P PPP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.041
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = +3
Query: 723 PXXXHXXNNXXXXPPPPPP----LXXXXXXXKXXTXPPPXPPRXXPPXXPPPXP 872
P + +N PPPPPP + + PPP PPR P P P
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 760 PPPPPPPSXXXXFXXKXPXXPPPXPRAXXPPXPXP 864
PPPPPPPS K P + PP P P
Sbjct: 311 PPPPPPPSRRN--RGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 765 PPPPPLXXXXXXXKXXTXPPPXPPRXXPPXXPPPXPP 875
P PPL PP P PP PP PP
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 27.1 bits (57), Expect = 3.6
Identities = 23/88 (26%), Positives = 25/88 (28%), Gaps = 3/88 (3%)
Frame = +1
Query: 604 PPXKKXKXXXPPXXXXP--PXXXPPPKPXXGGGGXXFFFLXXPXXXTKXTTXXXPPPPPP 777
PP + P P P P P G P T + PP P
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRT----STPPVPTPPSLPPSAPPSLP 432
Query: 778 PSXXXXFXXKXPXXPPPXPRA-XXPPXP 858
PS P PP P A PP P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/38 (34%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Frame = +3
Query: 762 PPPPPPLXXXXXXXKXXTXPPPXPP-RXXPPXXPPPXP 872
PP PP PP PP PP P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.041
Identities = 26/88 (29%), Positives = 26/88 (29%), Gaps = 1/88 (1%)
Frame = +1
Query: 604 PPXKKXKXXXPPXXXXPPXXXPPPKPXXGGGGXXFFFLXXPXXXTKXTTXXXPPPPPPPS 783
PP K PP P PKP G P PP PPPS
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV----PPVPPPS 1214
Query: 784 XXXXFXXKXPXXPP-PXPRAXXPPXPXP 864
PP P P A PP P P
Sbjct: 1215 TAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 31.5 bits (68), Expect = 0.17
Identities = 24/87 (27%), Positives = 25/87 (28%)
Frame = +1
Query: 604 PPXKKXKXXXPPXXXXPPXXXPPPKPXXGGGGXXFFFLXXPXXXTKXTTXXXPPPPPPPS 783
PP K PP P P PKP P PP PPPS
Sbjct: 1140 PPVPKPSVAAPPVPA-PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV---PPVPPPS 1195
Query: 784 XXXXFXXKXPXXPPPXPRAXXPPXPXP 864
PP P + PP P P
Sbjct: 1196 EAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/87 (24%), Positives = 23/87 (26%)
Frame = +1
Query: 604 PPXKKXKXXXPPXXXXPPXXXPPPKPXXGGGGXXFFFLXXPXXXTKXTTXXXPPPPPPPS 783
PP K PP P P P P + PPP P PS
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPP-VPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Query: 784 XXXXFXXKXPXXPPPXPRAXXPPXPXP 864
PP + PP P P
Sbjct: 1071 SEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Frame = +1
Query: 763 PPPPPPSXXXXFXXKXPXXPP-PXPRAXXPPXPXP 864
PP P PS PP P P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.2 bits (50), Expect(3) = 0.070
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 736 TKXTTXXXPPPPPPP 780
T + PPPPPPP
Sbjct: 181 TSLPSDYNPPPPPPP 195
Score = 24.2 bits (50), Expect(3) = 0.070
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 760 PPPPPPPS 783
PPPPPPP+
Sbjct: 191 PPPPPPPA 198
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 760 PPPPPPPS 783
PPPPPPP+
Sbjct: 238 PPPPPPPT 245
Score = 21.8 bits (44), Expect(2) = 2.0
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +1
Query: 724 PXXXTKXTTXXXPPPPPPP 780
P T P PPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPP 242
Score = 21.0 bits (42), Expect(3) = 0.070
Identities = 9/28 (32%), Positives = 10/28 (35%)
Frame = +1
Query: 766 PPPPPSXXXXFXXKXPXXPPPXPRAXXP 849
P PP+ P PPP P P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +1
Query: 760 PPP---PPPPSXXXXFXXKXPXXPPPXPRAXXPPXPXP 864
PPP PPPPS PPP P + P P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 763 PPPPPPSXXXXFXXKXPXXPPPXPRAXXPPXP 858
P PPPP P P P A PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 762 PPPPPPLXXXXXXXKXXTXP-PPXPPRXXPPXXPPPXPP 875
P PP+ + P PP PP PP PP PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP--PPSAPP 1722
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 760 PPPPPPPS 783
PPPPPPP+
Sbjct: 1096 PPPPPPPA 1103
Score = 22.2 bits (45), Expect(2) = 1.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 736 TKXTTXXXPPPPPP 777
+K + PPPPPP
Sbjct: 1089 SKPSAVPPPPPPPP 1102
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 871 GXGGGXXGGXXRGGXGGGXVXFXXXXXXKXRGGGGGGXXXXLXXXCXXXGXGGKK 707
G GG GG RGG GGG RGG GG G GG K
Sbjct: 16 GGRGGFNGG--RGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -3
Query: 871 GXGGGXXGGXXRGGXGGGXVXFXXXXXXKXRGGGGGG 761
G GG GG RGG GG F RGGG GG
Sbjct: 9 GGRGGSRGG--RGGFNGGRGGFGGGRGG-ARGGGRGG 42
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 874 GGXGGGXXGGXXRGGXGGGXVXFXXXXXXKXRGGGGGG 761
GG G GG RGG GGG RGG GG
Sbjct: 155 GGNSRGGFGGGSRGGFGGGS---RGGSRGGFRGGSRGG 189
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 874 GGXGGGXXGGXXRGGXGGG-XVXFXXXXXXKXRGGGGGG 761
GG GG GG RGG GGG F RGG GG
Sbjct: 148 GGSRGG-FGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 874 GGXGGGXXGGXXRGGXGGGXVXFXXXXXXKXRG 776
GG GGG GG G GG F RG
Sbjct: 160 GGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 760 PPPPPPP 780
PPPPPPP
Sbjct: 946 PPPPPPP 952
Score = 21.8 bits (44), Expect(2) = 2.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 748 TXXXPPPPPP 777
T PPPPPP
Sbjct: 903 THPTPPPPPP 912
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 864 GXGXXGXXXAGGWGGXXWXFXXKXGXXGGGGGGGG 760
G G G GG+GG F G GGG GG G
Sbjct: 236 GPGGFGGGP-GGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -1
Query: 879 FXXXXGXGXXGXXXAG--GWGGXXWXFXXKXGXXGGGGGGGG 760
F G G G G G+GG F G GGG GG G
Sbjct: 207 FGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,007,879
Number of Sequences: 5004
Number of extensions: 30682
Number of successful extensions: 385
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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