Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_C06
(1442 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 42 8e-04
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.071
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 35 0.12
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.22
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.22
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 34 0.22
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.50
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 33 0.50
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 33 0.66
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.88
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 2.0
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 31 2.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 2.7
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 30 3.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.5
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 8.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 8.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 8.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 8.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 8.2
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 42.3 bits (95), Expect = 8e-04
Identities = 25/66 (37%), Positives = 25/66 (37%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRGXXRXX 661
GG G G GG G G G WG G R GGG G G GGG G R
Sbjct: 220 GGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGG-GGGGYGYGGGGGGRRRSR 278
Query: 660 GRXXXR 643
R R
Sbjct: 279 SRDRRR 284
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 35.9 bits (79), Expect = 0.071
Identities = 21/55 (38%), Positives = 22/55 (40%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG +G G GGG RG
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGG--GGGGRGGGGGGRGGGGRG 134
Score = 35.1 bits (77), Expect = 0.12
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G G G G G G G G G G G GGG RG
Sbjct: 51 GGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRG 105
Score = 35.1 bits (77), Expect = 0.12
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -3
Query: 837 GXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
G G G GG G G G G GGG G G GGG RG
Sbjct: 69 GGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRG 122
Score = 34.7 bits (76), Expect = 0.16
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G R GGG G G GGG RG
Sbjct: 60 GGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGG--GRGGGGGGRG 112
Score = 33.5 bits (73), Expect = 0.38
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G GG G G G G G R GGG G G GGG RG
Sbjct: 77 GGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG--GRGGGGGGRG 129
Score = 32.3 bits (70), Expect = 0.88
Identities = 23/64 (35%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = -3
Query: 864 GXEXRXXXGGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGG-GXKGEXGXXXGG 688
G R GG G G GG G G G WG G GG G G G GG
Sbjct: 41 GGWGRPGWGGGGPGWGRGGGGSGWGGGRG----GGWGNNGGGGNWGGNGGGGNGGGGRGG 96
Query: 687 GXRG 676
G G
Sbjct: 97 GGGG 100
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = -2
Query: 847 GXXGXW--XGGGGXXGXXXXGGXXXXAXRXXXG*XRGKXGXGGRXEG 713
G G W GGGG G GG R G RG G GG G
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRG 122
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 35.1 bits (77), Expect = 0.12
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 810 GGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G WG +G GG G G GGG RG
Sbjct: 118 GGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRG 162
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRGXXRXX 661
G G + GG G G WG G + G G + G GGG G
Sbjct: 202 GNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGGGGRGGGWGGW 261
Query: 660 GR 655
GR
Sbjct: 262 GR 263
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGG----GXKGEXGXXXGGGXRG 676
GG G + GG G G G WG + +GG G+ G GGG RG
Sbjct: 146 GGWGGSQ---GGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRG 201
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGG 685
GG + G G G WG +G + GGG G G GG
Sbjct: 121 GGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGG 172
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 851 GGXXGGXXGGRXXXGGXXGGG 789
GG GG GGR GG GGG
Sbjct: 50 GGTGGGRGGGRGGSGGGRGGG 70
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.22
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG G G GGG G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Score = 33.9 bits (74), Expect = 0.29
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG G G GGG G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G GGG G G GGG G
Sbjct: 57 GGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG G G GG G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.22
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG G G GGG G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSG 145
Score = 33.9 bits (74), Expect = 0.29
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG G G GGG G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G GGG G G GGG G
Sbjct: 57 GGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG G G GG G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 34.3 bits (75), Expect = 0.22
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRGXXRXX 661
GG G G GG G G G G G GGG G G GGG G
Sbjct: 153 GGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGG 212
Query: 660 G 658
G
Sbjct: 213 G 213
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXG-XGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG G+ G GGG G
Sbjct: 117 GGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGG 172
Score = 29.1 bits (62), Expect = 8.2
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 837 GXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
G G G GG G G G G GGG G G GGG G
Sbjct: 141 GGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMG 194
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 33.5 bits (73), Expect = 0.38
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G + GG G G G +G+ G R GG +G G GG RG
Sbjct: 103 GGNGGFDDNGGGRGGNGGGRGGT--GGFGDNGGGRGGNGGGRGGNGGGNNGGGRG 155
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 4/59 (6%)
Frame = -3
Query: 840 GGXGXGEXXXG--GXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXG--GGXRG 676
GG G G G G G G G +G G GGG G G G GG RG
Sbjct: 25 GGPGFGGPGSGGPGPRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGGGRG 83
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.50
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG G G GGG G
Sbjct: 134 GGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGG 188
Score = 30.3 bits (65), Expect = 3.5
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G GG G G G G G GGG G G GGG G
Sbjct: 125 GGGGCGGGCGGG--GGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 177
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 33.1 bits (72), Expect = 0.50
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = -3
Query: 852 RXXXGGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKG-EXGXXXGGGXRG 676
R GG G GG G G G +G G GGG G + G GGG RG
Sbjct: 288 RADAGGERGGRGGRGGFGG-GRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRG 346
Query: 675 XXRXXGRXXXR 643
R R R
Sbjct: 347 GDRGGFRGGDR 357
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 32.7 bits (71), Expect = 0.66
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGG 685
GG G G GG G G G G GGG G G GGG
Sbjct: 790 GGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGG 841
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRGXXRXX 661
GG G G GG G G G G GGG G G GG G
Sbjct: 788 GGGGGGNGGSGGGGGGGGGGSG---GSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGD 844
Query: 660 G 658
G
Sbjct: 845 G 845
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.3 bits (70), Expect = 0.88
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 765 GXWGEXEGXRXEGGGXKGEXGXXXGGG-XRGXXRXXG 658
G WG G R GGG G G GGG RG R G
Sbjct: 30 GRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGG 66
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGG 685
GG G G+ G G WG G GGG +G+ G GG
Sbjct: 61 GGRGGGDWGGNNGGGGNWGGNGGGRGDWG-GNGGGGRGGGGRGDWGGNNNGG 111
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -3
Query: 852 RXXXGGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
R GG G G GG G G WG GG G G GGG RG
Sbjct: 85 RGDWGGNGGGGRGGGGRGDWGGNNNGGG-GNWGGGGNNDGGWGGNNGGGGGGRGGGGRG 142
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXE---GGGXKGEXGXXXGGGXRGXX 670
GG G G G G G G WG G GG +G+ G GGG G
Sbjct: 42 GGGGPGGWGNNGGGGWGRGGGRGG-GDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGG 100
Query: 669 R 667
R
Sbjct: 101 R 101
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = -1
Query: 857 KXGGXXGGXXGGRXXXGGXXGGGXAKXCXKXXXGVXKREXGXRGEEXRXXXEXXEGXGTX 678
+ GG GG GG GG GG G R G RG+ G G
Sbjct: 59 RGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGD---WGGNNNGGGGNW 115
Query: 677 GAXGXXGGXXDAXXSSXGG 621
G G G GG
Sbjct: 116 GGGGNNDGGWGGNNGGGGG 134
Score = 29.9 bits (64), Expect = 4.7
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXK--GEXGXXXGGGXRGXXR 667
GG G G GG G G WG G GG + G+ G GGG
Sbjct: 23 GGWGGGPGRWGG-WGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGN 81
Query: 666 XXGR 655
GR
Sbjct: 82 GGGR 85
Score = 29.1 bits (62), Expect = 8.2
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -3
Query: 837 GXGXGEXXXGGXXGXG-XXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXR 679
G G G GG G G G WG G GGG +G G G G R
Sbjct: 130 GGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRG-GGGGGGAGER 182
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +1
Query: 658 PXXPXAPXVPXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPXXPPXXXLPPXXP 837
P P P P P + P P ++ P PPP P LPP P
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAP-TGVPLPVPPPPPLFSPSMILPPPPP 1394
Query: 838 P 840
P
Sbjct: 1395 P 1395
Score = 29.9 bits (64), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 790 PPPXXPPXXXLPPXXPPXXPP 852
PPP PP L P PP PP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPP 1362
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 825 GEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRGXXR 667
G G G G G + G GGG G G GGG RG R
Sbjct: 14 GSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGR 66
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/64 (26%), Positives = 20/64 (31%)
Frame = +1
Query: 658 PXXPXAPXVPXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPXXPPXXXLPPXXP 837
P P +P P + L + P P A PPP PP P P
Sbjct: 533 PAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Query: 838 PXXP 849
P P
Sbjct: 593 PPPP 596
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = -3
Query: 864 GXEXRXXXGGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGG 685
G R GG G G G G G G +G GGG G G GGG
Sbjct: 804 GFGQRGGYGGRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGG--GSFGGSGGGG 861
Query: 684 XRGXXRXXG 658
G + G
Sbjct: 862 GFGGVKPSG 870
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/81 (25%), Positives = 23/81 (28%), Gaps = 5/81 (6%)
Frame = +1
Query: 655 PPXXPXAPXV-----PXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPXXPPXXX 819
PP P P + P P + P P P PPP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPPPPGG 767
Query: 820 LPPXXPPXXPPXFXSXXXXSP 882
PP PP P F P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/81 (25%), Positives = 23/81 (28%), Gaps = 5/81 (6%)
Frame = +1
Query: 655 PPXXPXAPXV-----PXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPXXPPXXX 819
PP P P + P P + P P P PPP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPPPPGG 767
Query: 820 LPPXXPPXXPPXFXSXXXXSP 882
PP PP P F P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/81 (25%), Positives = 23/81 (28%), Gaps = 5/81 (6%)
Frame = +1
Query: 655 PPXXPXAPXV-----PXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPXXPPXXX 819
PP P P + P P + P P P PPP PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPPPPGG 350
Query: 820 LPPXXPPXXPPXFXSXXXXSP 882
PP PP P F P
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPP 371
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.5 bits (63), Expect = 6.2
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXE-GGGXKGEXGXXXGGGXRGXXR 667
GG G GG G G G G G R GGG +G GGG RG R
Sbjct: 10 GGGGGFRGGRGGDRG-GSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFR 67
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/77 (24%), Positives = 21/77 (27%)
Frame = +1
Query: 622 PPXDXXXASXXPPXXPXAPXVPXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPX 801
PP + PP P P P PS + P P P P
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 358
Query: 802 XPPXXXLPPXXPPXXPP 852
P PP P PP
Sbjct: 359 GPGMYPPPPPSRPPAPP 375
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 6.2
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 727 PLXPXSLXLTPXXXXXXXXAXPPPXXPPXXXLPPXXPPXXPP 852
P P + P PP PP PP PP PP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/77 (24%), Positives = 21/77 (27%)
Frame = +1
Query: 622 PPXDXXXASXXPPXXPXAPXVPXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPX 801
PP + PP P P P PS + P P P P
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 368
Query: 802 XPPXXXLPPXXPPXXPP 852
P PP P PP
Sbjct: 369 GPGMYPPPPPSRPPAPP 385
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 8.2
Identities = 16/61 (26%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = +1
Query: 793 PPXXPPXXXL---PPXXPPXXPPXFXSXXXXSPNXRHLXPHXXXSXPSXHAXXPXXFLHX 963
PP PP P PP PP F PN + H H P ++
Sbjct: 446 PPPGPPGAYPGNGAPGGPPGGPPQFPGHPGMDPNYHYYQQHGMMPPHPGHPGYPPQHMNA 505
Query: 964 F 966
F
Sbjct: 506 F 506
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +1
Query: 667 PXAPXVPXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPXXPPXXX-LPPXXPPX 843
P AP P P + +P P + P A PPP PP PP PP
Sbjct: 198 PHAPPPPVPLTSNIPQAPPAPPPPIG-GIAPVNAHG---APPPPPLPPVGAGAPPPPPPP 253
Query: 844 XPP 852
PP
Sbjct: 254 PPP 256
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 8.2
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -3
Query: 840 GGXGXGEXXXGGXXGXGXXXXXXXXGXWGEXEGXRXEGGGXKGEXGXXXGGGXRG 676
GG G G G G G G G G GGG G G GGG G
Sbjct: 76 GGGGYGGGHGGAAVGGGYGGAVGGGGGGGYGGG---HGGGHGGAVGGGYGGGGGG 127
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +1
Query: 667 PXAPXVPXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPXXPPXXX-LPPXXPPX 843
P AP P P + +P P + P A PPP PP PP PP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIG-GIAPVNAHG---APPPPPLPPVGAGAPPPPPPP 239
Query: 844 XPP 852
PP
Sbjct: 240 PPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +1
Query: 667 PXAPXVPXPSXXSXLXLXSSPLXPXSLXLTPXXXXXXXXAXPPPXXPPXXX-LPPXXPPX 843
P AP P P + +P P + P A PPP PP PP PP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIG-GIAPVNAHG---APPPPPLPPVGAGAPPPPPPP 239
Query: 844 XPP 852
PP
Sbjct: 240 PPP 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,195,344
Number of Sequences: 27780
Number of extensions: 115665
Number of successful extensions: 1237
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4121044488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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