Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_C05
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.26 
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    32   0.61 
Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical p...    30   2.5  
AF026212-4|AAF99973.2|  386|Caenorhabditis elegans Hypothetical ...    28   9.9  
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 90  LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 179
           L LC LLA  SA   YY  S + PY++Y P
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -2

Query: 531 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 427
           AF + G  F  R  R P  L   HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


>Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical
           protein T05G5.12 protein.
          Length = 92

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = +3

Query: 417 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPXAEPTETXSTNVSR 596
           S F  Y K+++   D   + ++ Y+K     T P+ QK  + S    A    T ST  S 
Sbjct: 5   SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSSS 64

Query: 597 EEMEFTTES 623
           +    + +S
Sbjct: 65  KRYTSSQQS 73


>AF026212-4|AAF99973.2|  386|Caenorhabditis elegans Hypothetical
           protein F52G3.5 protein.
          Length = 386

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 522 KQKQPEDSKRPXAEPTETXSTNVSREEMEFTTESNVRDVD 641
           + K+P+ +K      T T +   + EE   TTE +V D++
Sbjct: 215 RSKRPKTTKTTTTSTTTTEAPTTTTEEYTTTTEEDVTDLE 254


>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
           protein R155.3 protein.
          Length = 1165

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +3

Query: 477 SWVY--EKD-VLKITFPLKQKQPEDSKRPXAEPTETXSTNVSREEMEFTTESNVRDV 638
           SW Y  +KD   +  F +++   E+ K+P  +   +   N    E+E T + +++DV
Sbjct: 686 SWFYLHQKDPAARKCFAIRELPMEEVKKPVKKKDVSKMDNKPERELEKTQDESIKDV 742


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,618,422
Number of Sequences: 27780
Number of extensions: 340177
Number of successful extensions: 946
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)