SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_C04
         (958 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.1  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   9.4  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   9.4  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   9.4  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   9.4  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   9.4  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   9.4  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   9.4  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   9.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   9.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   9.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   9.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   9.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   9.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   9.4  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    22   9.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   9.4  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 920  PLXGXXXPPPPP 955
            P+ G   PPPPP
Sbjct: 1852 PVSGSPEPPPPP 1863


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNP 146


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNP 146


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNP 146


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNP 146


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNP 146


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNP 146


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNP 146


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNP 395


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNP 395


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNP 395


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNP 395


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNP 395


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNP 395


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 372 PLTPFPPRFIPPDMYRLRPPPNP 394


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 357 PLTPFPPRFIPPDMYRLRPPPNP 379


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 886 PXCPPPXGXXPPXLGGXXPPPPP 954
           P  P P    PP +    PPP P
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNP 395


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,860
Number of Sequences: 438
Number of extensions: 3397
Number of successful extensions: 58
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31444140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -