Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_C02
         (879 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9XTN0 Cluster: Peptidoglycan recognition protein precu...    37   0.78 
UniRef50_A3A859 Cluster: Putative uncharacterized protein; n=1; ...    35   2.4  
UniRef50_Q59RR0 Cluster: Potential zinc finger transcription fac...    34   4.1  
UniRef50_O17265 Cluster: Putative uncharacterized protein; n=3; ...    34   5.5  
UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14; Fungi/M...    34   5.5  
UniRef50_Q4PAX7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q2QR52 Cluster: Transposon protein, putative, CACTA, En...    33   9.6  

>UniRef50_Q9XTN0 Cluster: Peptidoglycan recognition protein
           precursor; n=6; Ditrysia|Rep: Peptidoglycan recognition
           protein precursor - Bombyx mori (Silk moth)
          Length = 196

 Score = 36.7 bits (81), Expect = 0.78
 Identities = 18/28 (64%), Positives = 19/28 (67%)
 Frame = +1

Query: 175 VVSKKQWDGLXPGDVXYLAPAVXLFXVK 258
           VVSKKQWDGL P  V YLA  V L  V+
Sbjct: 27  VVSKKQWDGLIPVHVSYLARPVSLVIVQ 54


>UniRef50_A3A859 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 300

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 30/79 (37%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
 Frame = +2

Query: 17  PHYREFLRFKLWRMPRADVLARAAPR-HGPPPLGSCTRARSQLA-----XHRNSSRMATS 178
           P Y  FL     R+PRA  L R  PR   P P G+ T A  + A         SSR ATS
Sbjct: 93  PSYHLFLNRLAARLPRALRLRRLPPRARAPAPGGATTTASPRSAGCSPPPTPGSSRAATS 152

Query: 179 SV-KSNGTV*XPVTXXTWP 232
           +   S GT     +  TWP
Sbjct: 153 TACPSPGTAPAATSATTWP 171


>UniRef50_Q59RR0 Cluster: Potential zinc finger transcription
           factor; n=1; Candida albicans|Rep: Potential zinc finger
           transcription factor - Candida albicans (Yeast)
          Length = 783

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -2

Query: 182 LTTXPFGCYFCXKRAESEREYNCRVEAGHVEER 84
           L+  PFGC FC KR   + + N  V+ GH+E R
Sbjct: 674 LSDRPFGCQFCPKRFVRQHDLNRHVK-GHIEAR 705


>UniRef50_O17265 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 528

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 23/85 (27%), Positives = 23/85 (27%)
 Frame = +2

Query: 398 PXXXXXXPPXPXGXTPXGPPXXXFFSXXFXPXXPPPGAXFXXXPPXFFXPXXXKTXXXXX 577
           P      PP P G  P  PP   F      P   PP   F   PP  F P          
Sbjct: 290 PPPFGFFPPPPRGHFP--PPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGG 347

Query: 578 XXXXXFXGPPXIXFFX*KPPRXKXP 652
                F  PP        PP    P
Sbjct: 348 PYPPFFPPPPPHFMRPSSPPTDGGP 372


>UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14;
            Fungi/Metazoa group|Rep: Cytokinesis protein sepA -
            Emericella nidulans (Aspergillus nidulans)
          Length = 1790

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = +2

Query: 398  PXXXXXXPPXPXGXTPXGPPXXXFFSXXFXPXXPPPGAXFXXXPP 532
            P      PP   G  P  PP    F     P  PPPG  F   PP
Sbjct: 1069 PPPPPPPPPGGFGGPPPPPPPPGGFGGPPPPPPPPPGGAFGVPPP 1113


>UniRef50_Q4PAX7 Cluster: Putative uncharacterized protein; n=1;
            Ustilago maydis|Rep: Putative uncharacterized protein -
            Ustilago maydis (Smut fungus)
          Length = 2222

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 86   APRHGPPPLGSCTRARSQLAXH 151
            AP  GPP +GS +RARS LA H
Sbjct: 2144 APSRGPPGMGSLSRARSNLADH 2165


>UniRef50_Q2QR52 Cluster: Transposon protein, putative, CACTA,
           En/Spm sub-class, expressed; n=3; Oryza sativa|Rep:
           Transposon protein, putative, CACTA, En/Spm sub-class,
           expressed - Oryza sativa subsp. japonica (Rice)
          Length = 378

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 17/50 (34%), Positives = 17/50 (34%)
 Frame = +2

Query: 398 PXXXXXXPPXPXGXTPXGPPXXXFFSXXFXPXXPPPGAXFXXXPPXFFXP 547
           P      PP P    P  PP    F     P  PPP   F   PP F  P
Sbjct: 244 PFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPP 293


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,289,886
Number of Sequences: 1657284
Number of extensions: 9514628
Number of successful extensions: 29841
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26989
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)