Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_B23
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical pr... 79 5e-15
AF003151-13|AAK18907.1| 159|Caenorhabditis elegans Ribosomal pr... 33 0.27
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 30 1.9
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 30 1.9
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 30 1.9
U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical pr... 30 2.5
U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 29 4.3
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 4.3
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 7.6
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 7.6
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 7.6
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 28 7.6
AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical
protein C03D6.8 protein.
Length = 162
Score = 78.6 bits (185), Expect = 5e-15
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Frame = +2
Query: 248 KRRRIPXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKKVEEIR 427
K+++ P K ++TKA R+ GKEL D + E+RR+ P+KY R ++ KTIEA K + ++
Sbjct: 41 KKKKNPRKLRFTKAARRARGKELINDATQLLEQRRDEPVKYERAMFQKTIEAAKTISALK 100
Query: 428 QRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAA---GLKQRQALXATEMEVEPE 598
+R N I +RL+ G+ V+ + + +V + + LI++P A G+K R A + E
Sbjct: 101 TKRYGNLIRKRLQPGKIVQKKGLLAKVDKKMHLIRAPVANRDGVKTRAAAKEKKTAESME 160
Query: 599 T 601
T
Sbjct: 161 T 161
Score = 68.5 bits (160), Expect = 6e-12
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +1
Query: 163 VYPGHGIQFVRNDCKIFRFCRSKCHAAFKKKKNPR 267
+YPGHGIQFVRND +F+FCRS+C+ FKKKKNPR
Sbjct: 13 IYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPR 47
>AF003151-13|AAK18907.1| 159|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 24.1 protein.
Length = 159
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 163 VYPGHGIQFVRNDCKIFRFCRSKCHAAFKKKKNPR 267
++PGHG + VR D K+ F K K ++NPR
Sbjct: 13 IHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPR 47
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 481 RVAKRRARSPERHLFDKVTSGWSETATS-FXSHRNGSGTRDNRSCGR*RQET 633
R K+R +SP R D GW T S + R SG NRS R Q T
Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 481 RVAKRRARSPERHLFDKVTSGWSETATS-FXSHRNGSGTRDNRSCGR*RQET 633
R K+R +SP R D GW T S + R SG NRS R Q T
Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 43 KCGTXXXXXXXDVCCQNSARHTCLKPIK 126
+C D CCQN+ TC++P+K
Sbjct: 218 QCANDLDCGSVDKCCQNACGSTCMEPLK 245
>U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical
protein C41A3.2b protein.
Length = 526
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2
Query: 302 AGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREV 481
AG E + + + KRR + R + E KKV+E ++R ++ + +++ REV
Sbjct: 429 AGNEKELSKTEQRAKRRQRVREKARLCAEQAKEEEKKVKE-QKRIEHDLRIMSMKKEREV 487
Query: 482 EWQRDVREVQRDISLIK 532
+ Q D + +RDI I+
Sbjct: 488 KHQLDFEKRKRDIDNIR 504
>U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical
protein C41A3.2a protein.
Length = 795
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2
Query: 302 AGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREV 481
AG E + + + KRR + R + E KKV+E ++R ++ + +++ REV
Sbjct: 429 AGNEKELSKTEQRAKRRQRVREKARLCAEQAKEEEKKVKE-QKRIEHDLRIMSMKKEREV 487
Query: 482 EWQRDVREVQRDISLIK 532
+ Q D + +RDI I+
Sbjct: 488 KHQLDFEKRKRDIDNIR 504
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/71 (32%), Positives = 27/71 (38%)
Frame = +1
Query: 457 AIETGQRGRVAKRRARSPERHLFDKVTSGWSETATSFXSHRNGSGTRDNRSCGR*RQETD 636
A+ R R A R SP + T+G S+ S S G GTR S R R
Sbjct: 44 AVARRGRNRAAARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRGTTSARRGRGSA- 102
Query: 637 Y*GSGHGTCNR 669
G T NR
Sbjct: 103 --RGGEATMNR 111
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +2
Query: 341 EKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDI 520
E+R+N + E +++E EEI++ +S + Q+L Q E++ +R V+E+
Sbjct: 392 EQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKR-VQELTEQR 450
Query: 521 SLIKSPAA 544
+++S A+
Sbjct: 451 KVLESKAS 458
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +2
Query: 341 EKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDI 520
E+R+N + E +++E EEI++ +S + Q+L Q E++ +R V+E+
Sbjct: 392 EQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKR-VQELTEQR 450
Query: 521 SLIKSPAA 544
+++S A+
Sbjct: 451 KVLESKAS 458
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 28.7 bits (61), Expect = 5.7
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Frame = +2
Query: 200 TAKFSDSVVQNATQRLKRR---RIPXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKY 370
T D VV+ R K R K +WTKA + E S + S + R LK
Sbjct: 89 TEHLKDRVVEALDARRKEHDTVRNALKVEWTKATKSLHDCEESYEKSKITLRMREEALKK 148
Query: 371 NRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGL 550
RE +T + + E R+RR ++ R VE + +++ + + ++ A
Sbjct: 149 ARESCLRTESSPPEREASRRRRDLE------KKSRAVE-EAMIKKEEAERQVVSITAELR 201
Query: 551 KQRQALXATEMEVEPETIEVV 613
K+R+ + T+ V E++
Sbjct: 202 KKRRDIDKTKESVVERLRELI 222
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 28.7 bits (61), Expect = 5.7
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Frame = +2
Query: 200 TAKFSDSVVQNATQRLKRR---RIPXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKY 370
T D VV+ R K R K +WTKA + E S + S + R LK
Sbjct: 89 TEHLKDRVVEALDARRKEHDTVRNALKVEWTKATKSLHDCEESYEKSKITLRMREEALKK 148
Query: 371 NRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGL 550
RE +T + + E R+RR ++ R VE + +++ + + ++ A
Sbjct: 149 ARESCLRTESSPPEREASRRRRDLE------KKSRAVE-EAMIKKEEAERQVVSITAELR 201
Query: 551 KQRQALXATEMEVEPETIEVV 613
K+R+ + T+ V E++
Sbjct: 202 KKRRDIDKTKESVVERLRELI 222
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = +2
Query: 398 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALXAT 577
+A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK + + A
Sbjct: 1770 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALKGGKKVIAK 1823
Query: 578 EMEVEPETIEVVDAKGRK 631
+ E +D + R+
Sbjct: 1824 LEQRVRELESELDGEQRR 1841
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = +2
Query: 398 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALXAT 577
+A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK + + A
Sbjct: 1770 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALKGGKKVIAK 1823
Query: 578 EMEVEPETIEVVDAKGRK 631
+ E +D + R+
Sbjct: 1824 LEQRVRELESELDGEQRR 1841
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = +2
Query: 398 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALXAT 577
+A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK + + A
Sbjct: 1773 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALKGGKKVIAK 1826
Query: 578 EMEVEPETIEVVDAKGRK 631
+ E +D + R+
Sbjct: 1827 LEQRVRELESELDGEQRR 1844
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/89 (17%), Positives = 40/89 (44%)
Frame = +2
Query: 335 EFEKRRNVPLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQR 514
E ++R + K E + +++ ++ Q+ NY++ + + E ++ E +
Sbjct: 957 EEKERLEIEAKKEAERQREIKRKLEEQQQNAQKEHENYLISEIHKAAEETEKKRQNEEKE 1016
Query: 515 DISLIKSPAAGLKQRQALXATEMEVEPET 601
+ + S AL +++ME+EP +
Sbjct: 1017 KLDKMVSNRLAEADGVALISSKMEIEPSS 1045
>AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical
protein F26D11.2 protein.
Length = 384
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +2
Query: 224 VQNATQRLKRRRIPXKTKWTKAYRKTAGKELSIDPSFEFEKRRNVPLKYNRELWTKTIEA 403
++ + +L+RR K + A K A KE I + KRR LK R + A
Sbjct: 224 IKRSPTKLRRRSRLTKAQLETAI-KNAEKEARIAEMEKILKRRKAQLKERRSARKQRELA 282
Query: 404 MKKVEEIRQRR 436
MKK E R+ R
Sbjct: 283 MKKRRESRKLR 293
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,680,777
Number of Sequences: 27780
Number of extensions: 343232
Number of successful extensions: 928
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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