Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_B22
(886 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 31 4.2
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 31 4.2
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 4.2
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 4.2
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 4.2
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 4.2
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 4.2
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 4.2
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 4.2
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 4.2
BC146811-1|AAI46812.1| 854|Homo sapiens ZNF341 protein protein. 31 7.3
BC132873-1|AAI32874.1| 854|Homo sapiens ZNF341 protein protein. 31 7.3
BC094738-1|AAH94738.1| 795|Homo sapiens ZNF341 protein protein. 31 7.3
AL050349-3|CAI21796.2| 847|Homo sapiens zinc finger protein 341... 31 7.3
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 224 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 252 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 252 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>BC146811-1|AAI46812.1| 854|Homo sapiens ZNF341 protein protein.
Length = 854
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 684 PPPXXPPXPXQKXXPPGR 737
PPP PP P Q PPGR
Sbjct: 192 PPPQPPPPPPQSLGPPGR 209
>BC132873-1|AAI32874.1| 854|Homo sapiens ZNF341 protein protein.
Length = 854
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 684 PPPXXPPXPXQKXXPPGR 737
PPP PP P Q PPGR
Sbjct: 192 PPPQPPPPPPQSLGPPGR 209
>BC094738-1|AAH94738.1| 795|Homo sapiens ZNF341 protein protein.
Length = 795
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 684 PPPXXPPXPXQKXXPPGR 737
PPP PP P Q PPGR
Sbjct: 133 PPPQPPPPPPQSLGPPGR 150
>AL050349-3|CAI21796.2| 847|Homo sapiens zinc finger protein 341
protein.
Length = 847
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 684 PPPXXPPXPXQKXXPPGR 737
PPP PP P Q PPGR
Sbjct: 192 PPPQPPPPPPQSLGPPGR 209
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,352,494
Number of Sequences: 237096
Number of extensions: 2756913
Number of successful extensions: 9240
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8780
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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