Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B21
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    26   0.38 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    25   0.50 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   3.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   4.7  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   6.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.2  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
 Frame = +1

Query: 604 PPPXXPPXXPXPPXXPPXPPPPP-PXXPPXPPXXXPP 711
           P P  PP        PP P  PP P  P  PP    P
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196



 Score = 25.4 bits (53), Expect = 0.50
 Identities = 17/54 (31%), Positives = 17/54 (31%)
 Frame = +3

Query: 594 PPXXPPXXPPPXPXPXPXXPXPPPPPPPXXPPXPXXPXPPXXXPXPXPXPXXPP 755
           PP        P   P P    P P  PP        P  P   P P P P  PP
Sbjct: 139 PPGNVLNLTMPKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLP-PIFPP 191



 Score = 25.0 bits (52), Expect = 0.67
 Identities = 13/43 (30%), Positives = 13/43 (30%)
 Frame = +1

Query: 526 PPXPPPPXXXXPPXXXXPPXPXXXPXPPPXXPPXXPXPPXXPP 654
           P   P P    P     P        PP    P  P PP  PP
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/43 (30%), Positives = 13/43 (30%)
 Frame = +1

Query: 559 PPXXXXPPXPXXXPXPPPXXPPXXPXPPXXPPXPPPPPPXXPP 687
           P     P      P  PP        PP     P P PP  PP
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/37 (32%), Positives = 12/37 (32%), Gaps = 2/37 (5%)
 Frame = +1

Query: 520 PXPPXPPPPXXXX--PPXXXXPPXPXXXPXPPPXXPP 624
           P P  PP        PP    PP P     PP    P
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/34 (32%), Positives = 11/34 (32%)
 Frame = +2

Query: 665 PPPPXXPPXPXXPXPPXXXPXPXPPPXXPPPPPP 766
           P P    P P  P          P P  PP P P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLP 186



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 493 PXXGXXPPXPXPPXPPP 543
           P     PP P PP  PP
Sbjct: 175 PPLPQVPPLPLPPIFPP 191


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 675 GGGGGGXXGXXGXGGG 628
           GG GGG  G  G GGG
Sbjct: 93  GGRGGGRDGDRGDGGG 108


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 657 PPPPPPP 677
           PPPPPPP
Sbjct: 731 PPPPPPP 737


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/36 (30%), Positives = 11/36 (30%)
 Frame = +2

Query: 623 PXPPPXPXXPXXPPPPPPXXPPXPXXPXPPXXXPXP 730
           P P   P      PPP    PP       P   P P
Sbjct: 267 PYPMQRPKSASLSPPPHVYNPPDHIQQATPYSAPGP 302


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 503 GPXPPPXXPPPPP 541
           GP P P  P PPP
Sbjct: 204 GPEPVPSTPYPPP 216



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 630 PXPXPXXPXPPP 665
           P P P  P PPP
Sbjct: 205 PEPVPSTPYPPP 216


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/32 (31%), Positives = 10/32 (31%)
 Frame = +1

Query: 526 PPXPPPPXXXXPPXXXXPPXPXXXPXPPPXXP 621
           PP   PP    P     PP       P P  P
Sbjct: 203 PPHQQPPIQQQPNQGQQPPGNTAAALPSPLYP 234


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/32 (31%), Positives = 10/32 (31%)
 Frame = +1

Query: 526 PPXPPPPXXXXPPXXXXPPXPXXXPXPPPXXP 621
           PP   PP    P     PP       P P  P
Sbjct: 205 PPHQQPPIQQQPNQGQQPPGNTAAALPSPLYP 236


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 640 PXXPPXPPPPP 672
           P  PP P PPP
Sbjct: 95  PTTPPTPSPPP 105



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/33 (30%), Positives = 10/33 (30%)
 Frame = +2

Query: 668 PPPXXPPXPXXPXPPXXXPXPXPPPXXPPPPPP 766
           PP    P P    P         P   P P PP
Sbjct: 72  PPKREIPSPKRSSPILAEKVSVSPTTPPTPSPP 104


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = +1

Query: 694 PXXXPPXXPXXXPPPXXXPP 753
           P   PP  P   PPP    P
Sbjct: 17  PLLTPPHNPAYSPPPSYCDP 36


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 629 PPPXPXXPXXPPPPPPXXP 685
           P P P  P  P P P   P
Sbjct: 80  PEPDPEIPVAPEPAPLASP 98


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +3

Query: 630  PXPXPXXPXPPPPPPPXXPPXPXXPXP 710
            P   P    PP PP    PP P    P
Sbjct: 1367 PEWQPTEWHPPIPPTSEKPPLPEELKP 1393


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/31 (35%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
 Frame = +1

Query: 622 PXXPXPPXXPPXPPPPPP-XXPPXPPXXXPP 711
           P  P        PPPP P   PP  P    P
Sbjct: 724 PLTPHEAFDVKLPPPPHPHHQPPRNPVGTNP 754



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 657 PPPPPPPXXPP 689
           PPPP P   PP
Sbjct: 736 PPPPHPHHQPP 746


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/31 (35%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
 Frame = +1

Query: 622 PXXPXPPXXPPXPPPPPP-XXPPXPPXXXPP 711
           P  P        PPPP P   PP  P    P
Sbjct: 616 PLTPHEAFDVKLPPPPHPHHQPPRNPVGTNP 646



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 657 PPPPPPPXXPP 689
           PPPP P   PP
Sbjct: 628 PPPPHPHHQPP 638


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/34 (32%), Positives = 11/34 (32%)
 Frame = +2

Query: 665 PPPPXXPPXPXXPXPPXXXPXPXPPPXXPPPPPP 766
           P P    P P  P          P P  PP P P
Sbjct: 153 PNPSIIDPGPALPPAGFLCNNYLPLPQVPPLPLP 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.154    0.551 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,536
Number of Sequences: 336
Number of extensions: 7176
Number of successful extensions: 47
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)