Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B17
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098996-1|AAM34815.1|  523|Caenorhabditis elegans Hypothetical ...    34   0.11 
U97007-2|AAB52298.2|  271|Caenorhabditis elegans Hypothetical pr...    31   0.81 
AF036699-1|AAB88362.1|  331|Caenorhabditis elegans Hypothetical ...    31   0.81 
U29488-12|AAA68769.3|  617|Caenorhabditis elegans Hypothetical p...    31   1.4  
U29380-3|AAA68744.1|  213|Caenorhabditis elegans Glutathione s-t...    31   1.4  
U22184-1|AAA64847.1|  348|Caenorhabditis elegans Wnt protein pro...    30   2.5  
U22179-1|AAA64846.1|  348|Caenorhabditis elegans Wnt protein pro...    30   2.5  
AC006627-1|AAK85460.1|  348|Caenorhabditis elegans Abnormal cell...    30   2.5  
U97007-3|AAB52299.1|  374|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AL021479-4|CAA16319.1|  301|Caenorhabditis elegans Hypothetical ...    28   7.5  
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical...    28   10.0 
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical...    28   10.0 

>AF098996-1|AAM34815.1|  523|Caenorhabditis elegans Hypothetical
           protein T11F1.7 protein.
          Length = 523

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = +1

Query: 322 IVMGDSITNIDVLLCENFEDLLNVYFQ-NFKIEGTSKPWKAFLGDWIH-DEIMRTFGIEY 495
           I     +TNIDV+    F +++N  FQ +F++EG  K   ++L DW    EI+    +E 
Sbjct: 125 ITNNSQLTNIDVISNFLFYNVVNRRFQCSFRVEGNEKLNASYLCDWWKITEIINPV-VER 183

Query: 496 DMKSDNCCYVLVKLTKKHRTVELEDLEG 579
           +++   C   L+  T  H   +   L G
Sbjct: 184 NLEDCKCRGDLITETNIHTYRDCTSLNG 211


>U97007-2|AAB52298.2|  271|Caenorhabditis elegans Hypothetical
           protein ZC196.8 protein.
          Length = 271

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 454 WIHDEIMRTFGIEYDMKSDNCCYVLVKLTKKHRTVELEDLEGI 582
           W+    +  FG+EY + S NC Y   K +K ++ V   D  GI
Sbjct: 90  WLASIYIFAFGVEYALMSSNCQYGYDKTSKNYQLVCEADNRGI 132


>AF036699-1|AAB88362.1|  331|Caenorhabditis elegans Hypothetical
           protein F58F6.6 protein.
          Length = 331

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 454 WIHDEIMRTFGIEYDMKSDNCCYVLVKLTKKHRTV 558
           WI    +  FG+EY + S NC Y   +L +K++ +
Sbjct: 149 WISSIYIFAFGVEYALMSSNCQYRFGELARKYQLI 183


>U29488-12|AAA68769.3|  617|Caenorhabditis elegans Hypothetical
           protein C56C10.1 protein.
          Length = 617

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +1

Query: 499 MKSDNCCYVLVKLTKKHRTVELEDLEGIRVRAYIQRAIDKLD-INDPAEIRRFMK 660
           +K DNC  +   +  KH T  LE L   + ++ IQ++I+K   I+D A+ R F++
Sbjct: 292 VKLDNCEDIFASIRNKHVTAALEFLHS-KAKS-IQKSIEKSSMIDDVADYRNFVE 344


>U29380-3|AAA68744.1|  213|Caenorhabditis elegans Glutathione
           s-transferase protein30 protein.
          Length = 213

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
 Frame = +1

Query: 262 EPIIPFSEKNIRVFANV----SSRIVMGDSITNIDVLLCENFEDLLN 390
           +  +P  +KN + F N      S  ++GDS+T +D+L+ ++  DLL+
Sbjct: 123 DTFLPNFKKNYQFFTNFLKASGSGFLIGDSVTWVDLLIAQHTSDLLS 169


>U22184-1|AAA64847.1|  348|Caenorhabditis elegans Wnt protein
           protein.
          Length = 348

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 27  GIP*DLSVAVTRSIRTIVIKCSLHYDFIVVGFVVLYRSVH*RRHRLRIEHWEC 185
           G P DL    +R++R+I + C  H   ++  F  +   +    +RLR + W+C
Sbjct: 52  GCPSDL--LHSRALRSIQLACRTHPATVISAFEGVQEGLQNCANRLRFQQWDC 102


>U22179-1|AAA64846.1|  348|Caenorhabditis elegans Wnt protein
           protein.
          Length = 348

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 27  GIP*DLSVAVTRSIRTIVIKCSLHYDFIVVGFVVLYRSVH*RRHRLRIEHWEC 185
           G P DL    +R++R+I + C  H   ++  F  +   +    +RLR + W+C
Sbjct: 52  GCPSDL--LHSRALRSIQLACRTHPATVISAFEGVQEGLQNCANRLRFQQWDC 102


>AC006627-1|AAK85460.1|  348|Caenorhabditis elegans Abnormal cell
           lineage protein 44,isoform a protein.
          Length = 348

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 27  GIP*DLSVAVTRSIRTIVIKCSLHYDFIVVGFVVLYRSVH*RRHRLRIEHWEC 185
           G P DL    +R++R+I + C  H   ++  F  +   +    +RLR + W+C
Sbjct: 52  GCPSDL--LHSRALRSIQLACRTHPATVISAFEGVQEGLQNCANRLRFQQWDC 102


>U97007-3|AAB52299.1|  374|Caenorhabditis elegans Hypothetical
           protein ZC196.9 protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 454 WIHDEIMRTFGIEYDMKSDNCCYVLVKLTKKHRTV 558
           WI    +  FG+EY +   NC Y   +L +K++ +
Sbjct: 192 WISSIYIFAFGVEYALMFSNCQYRFGELARKYQLI 226


>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
           protein B0393.5 protein.
          Length = 1106

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +1

Query: 181 NAIDLFANYGDLSQVTQVVSADYEMEDEPIIPFSEKNIRVFANVSSRIVMGDSIT 345
           N +++   YG   +V  VV   +E   +P++P SE N    A     +++GDS+T
Sbjct: 69  NEVNIQYRYGAQFRVRSVVLITWEGVKDPLVPESEGNTFQLA-----LIIGDSMT 118


>AL021479-4|CAA16319.1|  301|Caenorhabditis elegans Hypothetical
           protein Y22F5A.6 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
 Frame = +1

Query: 205 YGDLSQVT-QVVSADY---EMEDEPIIPFSEKNIRVFANVSSRIVMGDSITNIDVLLCEN 372
           +G L +V+ QV+  DY   E++D P IP+ E+N    A  S  I    + +++D L  + 
Sbjct: 28  FGLLQKVSEQVIDPDYNIPEVKDAPAIPYDERNSPTHA-YSVDISFHTTPSDMDCLRDQG 86

Query: 373 FEDLL--------NVYFQNFKIEGTSKPWKAFLGDWIH 462
           ++ +         N YF    +   +  ++A LG  ++
Sbjct: 87  YKSVFVRALNPIGNTYFDRNALNTINNAFEAGLGSEVY 124


>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
           protein C09E7.8b protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 349 IDVLLCENFEDLLNVYFQNFKIEGTSKPWKAFLGDWIHDEI 471
           +D+L  E F     +  +N   +   K WK+F  DW  DE+
Sbjct: 149 LDILNAEYFPKNYALPSKNPSFDTLYKQWKSFFPDWKPDEL 189


>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
           protein C09E7.8a protein.
          Length = 1114

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 349 IDVLLCENFEDLLNVYFQNFKIEGTSKPWKAFLGDWIHDEI 471
           +D+L  E F     +  +N   +   K WK+F  DW  DE+
Sbjct: 183 LDILNAEYFPKNYALPSKNPSFDTLYKQWKSFFPDWKPDEL 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,585,784
Number of Sequences: 27780
Number of extensions: 342104
Number of successful extensions: 779
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)