Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_B15
(900 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.024
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.097
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.097
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.17
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.39
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 29 0.90
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 1.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.6
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.1
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 2.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.7
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 6.3
SPBC31F10.08 |mde2||Mde2 protein|Schizosaccharomyces pombe|chr 2... 26 8.4
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.7 bits (81), Expect = 0.004
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 805 IXPRXPPXPPPPXXFPPPNXPXPXXP 882
+ P PP PPPP F PP+ P P P
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 33.1 bits (72), Expect = 0.055
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 820 PPXPPPPXXFPPPNXPXPXXPG 885
PP PPPP PP P P PG
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPG 31
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.024
Identities = 31/125 (24%), Positives = 36/125 (28%), Gaps = 5/125 (4%)
Frame = +3
Query: 522 SXXPPPPPPXXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPPPPXXTXPGHXTRP- 698
S PPPPPP G+ P P PPP P PP + P
Sbjct: 334 SSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP-RSAPSTGRQPPPLSSSRAVSNPPAPP 392
Query: 699 ---XSWTFRXXXXXXXXXXXXXPPH*XPVNHPPXRXPXYXPQVXPXXP-XPPXFPPX*XX 866
+ PP P + PP P P P P P PP
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Query: 867 SPXPP 881
+P P
Sbjct: 453 APIAP 457
Score = 31.5 bits (68), Expect = 0.17
Identities = 31/112 (27%), Positives = 38/112 (33%), Gaps = 2/112 (1%)
Frame = +2
Query: 569 GRGIXPFSXGVPXXSPXLNTDPPXXPFXATP--PP*XXXGXXNPPXFVDISPXPXXPXFG 742
GR P S +P PP P + P PP + P P P P
Sbjct: 373 GRQPPPLSSSRAVSNPP--APPPAIPGRSAPALPPLGNASRTSTP------PVPTPPSL- 423
Query: 743 XPSXTPPLXPXQPPTXXXXXLLXPGXPPXPXPPXXSPXLTXLXPPXPXXTPS 898
PS P L P PP+ + P PP P +P L P P P+
Sbjct: 424 PPSAPPSLPPSAPPS---LPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472
Score = 29.9 bits (64), Expect = 0.52
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 531 PPPPPPXXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPPPP 665
PP P P P S P+A P P +P P PP P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.1 bits (62), Expect = 0.90
Identities = 35/131 (26%), Positives = 36/131 (27%), Gaps = 8/131 (6%)
Frame = +3
Query: 531 PPPPPPXXPXVPG--AXGSXPLAXXFPXDPPP*IXIPLXXPXXPPPPXXTXPGHXTRPXS 704
PPPPPP G G+ P PPP PP P R
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 705 WTFRXXXXXXXXXXXXXPPH*XPVNHPPXRXPXYXP------QVXPXXPXPPXFPPX*XX 866
T R PP P P P P P P PP PP
Sbjct: 371 STGRQPPPLSSSRAVSNPPA-PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 867 SPXPPRXXPRL 899
S PP P L
Sbjct: 430 S-LPPSAPPSL 439
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Frame = +3
Query: 522 SXXPPPPPPXXPXVP-GAXGSXPLAXXFPXDPPP*IXIPLXXPX---XPPPPXXTXP 680
S P PP P +P GA + PL P PP +P P P PP P
Sbjct: 426 SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +2
Query: 758 PPLXPXQPPTXXXXXLLXPGXPPXPXPPXXSPXLTXLXPPXP 883
PP P P L P PP P P + PP P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +2
Query: 746 PSXTPPLXPXQPPTXXXXXLLXPGXPPXPXPP-XXSPXLTXLXPPXPXXTPS 898
PS + P P PP P PP P P +P + P P PS
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP-PLPPPS 296
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 534 PPPPPXXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXP 656
PP PP P P P A P P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.097
Identities = 27/101 (26%), Positives = 31/101 (30%)
Frame = +2
Query: 590 SXGVPXXSPXLNTDPPXXPFXATPPP*XXXGXXNPPXFVDISPXPXXPXFGXPSXTPPLX 769
S P P + P P A P P P P P G P PP
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP-- 1194
Query: 770 PXQPPTXXXXXLLXPGXPPXPXPPXXSPXLTXLXPPXPXXT 892
PP + P PP PP +P + PP P T
Sbjct: 1195 SEAPPVPKPSVGVPPVPPPSTAPPVPTP--SAGLPPVPVPT 1233
Score = 29.5 bits (63), Expect = 0.68
Identities = 29/110 (26%), Positives = 31/110 (28%), Gaps = 8/110 (7%)
Frame = +2
Query: 590 SXGVPXXSPXLNTDPPXXPFXATPP-P*XXXGXXNPPXFVDISPXPXX---PXFGXPSXT 757
S VP P P A PP P P V P P P PS
Sbjct: 1108 SVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVA 1167
Query: 758 PPLXPXQ----PPTXXXXXLLXPGXPPXPXPPXXSPXLTXLXPPXPXXTP 895
P P PP + P PP PP P + P P P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 28.7 bits (61), Expect = 1.2
Identities = 33/122 (27%), Positives = 36/122 (29%), Gaps = 3/122 (2%)
Frame = +3
Query: 522 SXXPPPPPP--XXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPPPPXXTXPGHXTR 695
S PP P P P VP G+ P+ PP + P P P P P
Sbjct: 1118 SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP--VPAPSGAPPVPKPSVAAPP--VPA 1173
Query: 696 PXSWTFRXXXXXXXXXXXXXPPH*XPVNHPPXRXPXY-XPQVXPXXPXPPXFPPX*XXSP 872
P S PP P PP P P V P PP P P
Sbjct: 1174 PSS-----GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 873 XP 878
P
Sbjct: 1229 VP 1230
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 531 PPPPPPXX--PXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPPPPXXTXP 680
PP P P P VP G+ P+ PP + +P P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP--VPVPSGAPPVPKPSVAAPP 1151
Score = 27.1 bits (57), Expect = 3.6
Identities = 22/88 (25%), Positives = 28/88 (31%)
Frame = +2
Query: 635 PXXPFXATPPP*XXXGXXNPPXFVDISPXPXXPXFGXPSXTPPLXPXQPPTXXXXXLLXP 814
P P + PP PP P P PS PP+ +P +
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPV---PKPSVAVPPVPAPSGAPPVP--KPSVAAPPVPVPS 1137
Query: 815 GXPPXPXPPXXSPXLTXLXPPXPXXTPS 898
G PP P P +P + P PS
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.097
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +2
Query: 713 SPXPXXPXFGXPSXTPPLXPXQPPTXXXXXLLXPGXPPXPXPPXXSPXLTXLXPPXPXXT 892
SP P P P+ P P PP G PP P PP P + PP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIM------GGPPPPPPP---PGVAGAGPPPPPPP 781
Query: 893 P 895
P
Sbjct: 782 P 782
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +2
Query: 620 LNTDPPXXPFXATPPP*XXXGXXNPPXFVDISPXPXXPXFGXPSXTPPLXPXQPP 784
L + PP P P P PP + P P P G PP P PP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +3
Query: 531 PPPPPPXXPXVPGAXGSXPLAXXFPX--DPPP*IXIPLXXPXXPPPPXXTXP 680
PPPPPP A P+ P PPP P PPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Frame = +3
Query: 531 PPPPP------PXXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPPPPXXTXPG 683
PPPPP P +P + + P PPP + P PPPP + G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +3
Query: 534 PPPPPXXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPPPPXXTXPGHXTRP 698
PPPPP VP P P PP I P PPPP G P
Sbjct: 732 PPPPPPAVIVP-----TPAPAPIPVPPPA--PIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = +2
Query: 692 PPXFVDISPXPXXPXFGXPSXTPPLXPXQPPTXXXXXLLXPGXPPXPXPPXXSPXLTXLX 871
PP I P P P P + PP PP P PP S +
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Query: 872 PPXPXXTP 895
P P P
Sbjct: 794 APAPQAEP 801
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 516 IYSXXPPPPPPXXPXVPGAXGSXPLAXXFPXDPPP 620
I PPPPPP PG G+ P P PPP
Sbjct: 757 IMGGPPPPPPP-----PGVAGAGP-----PPPPPP 781
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 534 PPPPPXXPXVPGAXGSXPLAXXFPXDPPP 620
PPPPP P A GS A +P P
Sbjct: 775 PPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.17
Identities = 26/84 (30%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = -1
Query: 882 GXGGXRXVRXGEXXGGXGXGGXPGXNXXXXXXVG-G*XGXSGGVKEGXPKXGXXGXGEMS 706
G GG G G G GG G G G G G EG P G G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 705 TX*GGFXXPXXXXGGGVAXKGXXG 634
GGF GGG G G
Sbjct: 249 GGLGGFGGGPGGFGGGPGGHGGPG 272
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.3 bits (65), Expect = 0.39
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = -3
Query: 883 RGGXGEXX*XGGXXGGXGXXGXTWGQ*XGXRXGGWLTGX*WGGXGGGAKXGXXGGGR 713
R G GG GG G +G GG G GG GG++ G GG R
Sbjct: 131 RNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSR 187
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = -3
Query: 850 GXXGGXGXXGXTWGQ*XGXRXGGWLTGX*WGGXGGGAKXGXXGGGRNVHEXG 695
G G G G G+ G GG+ G GG GGG++ G GG R G
Sbjct: 133 GPAGRGGRGGFRGGR--GGSRGGF-GGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 29.1 bits (62), Expect = 0.90
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 811 PRXPPXPPPPXXFPPP 858
PR PP PPPP PP
Sbjct: 223 PRGPPSPPPPVLHSPP 238
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Frame = +3
Query: 519 YSXXPPPPPPXXPXVPGAXGSXP---------LAXXFPXDPPP*IXIPLXXPXXPPPPXX 671
Y+ PPPPPP A + P ++ P P PL P PPPP
Sbjct: 187 YNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAP--PPPPPP 244
Query: 672 TXPGHXT 692
T P T
Sbjct: 245 TLPPQST 251
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +3
Query: 531 PPPPPPXXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPPPPXXT 674
PPPPPP G + P + P PP P P P T
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLT 1929
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +2
Query: 632 PPXXPFXATPPP*XXXGXXNPPXFVDISPXPXXPXF--GXPSXTPPLXP 772
PP P A PP PP + + P P P G PS PP P
Sbjct: 1690 PPVRPQSAAPP--QMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 531 PPPPPPXXPXVPGAXGSXPLAXXFPXDPPP 620
PPPPP P P A P+ P PPP
Sbjct: 1707 PPPPPMSVPPPPSA---PPMPAGPPSAPPP 1733
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 820 PPXPPPPXXFPPPNXPXPXXPG 885
P PPPP PPP P G
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAG 1726
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +3
Query: 531 PPPP----PPXXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPPP 662
PP P P P PG + P P P P +P P P P
Sbjct: 1448 PPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVP 1495
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +1
Query: 787 PXVXLXIXPRXPPXPPPPXXFPPPNXPXPXXP 882
P + + P PP P P PPP P P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 823 PXPPPPXXFPPPNXPXPXXPGXXP 894
P PPPP PP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -3
Query: 760 GGXGGGAKXGXXGGGRNVHEXGRVXXPGXVLXGGGGXKG 644
GG GGG + G GGGR GR G G GG G
Sbjct: 26 GGFGGG-RGGARGGGRGGARGGR-GGRGGARGGRGGSSG 62
Score = 27.1 bits (57), Expect = 3.6
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Frame = -3
Query: 850 GXXGGXGXXGXTWGQ*XGXRXGGWLTGX*WGGXGGGAKXGXXGGGRNVH--EXGRVXXPG 677
G GG G G G R G +GG GGA+ G GG R G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGG-------FGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Query: 676 XVLXGGGGXKG 644
G GG KG
Sbjct: 59 GSSGGRGGAKG 69
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 531 PPPPPPXXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPPPPXXTXPG 683
P P P +P GS P PPP + P PPPP + G
Sbjct: 112 PALPSRGTPSLPSRPGSRPSVLNQEQVPPPPVR-PNVMSQMPPPPSYSSSG 161
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 2.7
Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 13/72 (18%)
Frame = +3
Query: 531 PPPPPPXXPXVPGAXGSXPLAXXFPXDP------PP*I-----XIPLXXPXXPPPPXXTX 677
PPP P P +P P + P P PP +P P PPPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQA 209
Query: 678 PGHXT--RPXSW 707
P T RP S+
Sbjct: 210 PVANTSSRPSSF 221
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 749 SXTPPLXPXQPPTXXXXXLLXPGXPPXPXPPXXSPXLTXLXPPXPXXTP 895
S PP P PPT PP P P SP PP P P
Sbjct: 121 SAAPPSAPA-PPTPQSELRPPTSAPPRPSIPPPSPASA---PPIPSKAP 165
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 829 PPPPXXFPPPNXPXPXXPG 885
P PP F PP P P PG
Sbjct: 492 PLPPTTFAPPGVPLPPIPG 510
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 537 PPPPXXPXVPGAXGSXPLAXXFPXDPPP*IXIPLXXPXXPP--PPXXTXPG 683
PP P +PGA G L P PP + +P P P P PG
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPG 550
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 531 PPPPPPXXPXVPGAXG 578
PPPPPP P V A G
Sbjct: 945 PPPPPPPPPLVSAAGG 960
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 531 PPPPPPXXPXVPGAXGSXP 587
PPPPPP P A S P
Sbjct: 206 PPPPPPQQNYPPAASSSAP 224
>SPBC31F10.08 |mde2||Mde2 protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 209
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 306 FPYLSXAESFGHTKALXKHEMRKEMLNDKNRRIFKQ 413
F +S E+F +K L K + R L DKN + K+
Sbjct: 38 FDIISNKETFSESKQLKKAKSRNVTLVDKNTKADKR 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,798,432
Number of Sequences: 5004
Number of extensions: 49560
Number of successful extensions: 348
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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