Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B11
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0198 + 21890523-21891002                                         29   5.0  
07_01_0753 - 5799733-5799741,5799938-5800642                           29   6.7  
05_06_0282 + 26915249-26915881                                         29   6.7  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    29   6.7  

>03_05_0198 + 21890523-21891002
          Length = 159

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -1

Query: 771 GAPKAWLNWRXVDEEQGRXFR--TWRXGKN 688
           GA  AW  WR +DEE+ R  R  T R G N
Sbjct: 7   GAAAAWERWRQLDEEEERWRRPTTRRRGDN 36


>07_01_0753 - 5799733-5799741,5799938-5800642
          Length = 237

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +1

Query: 742 PPIQPCLGSSGXIVXRPPGXPPXPXGPXMVKXPXSS*HLLR 864
           PP QP           PP  PP P  P +V  P +S  L+R
Sbjct: 28  PPNQPYYAFPAAAYAPPPPPPPPPPPPTLVFVPVTSPVLVR 68


>05_06_0282 + 26915249-26915881
          Length = 210

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 763 GSSGXIVXRPPGXPPXPXGP 822
           G  G ++ RPPG  P P GP
Sbjct: 76  GGGGGVLRRPPGRGPPPPGP 95


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +1

Query: 742 PPIQPCLGSSGXIVXRPPGXPPXPXGPXMVKXPXSS*HLLRGFXYPFLNDP 894
           PP  P  GS   I   P    P P GP M   P +S  +     YP +N P
Sbjct: 457 PPPPPTTGSFMPIPSAPFAGLPVPAGP-MTAVPYNSYPVFPPMNYPMVNIP 506


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,355,151
Number of Sequences: 37544
Number of extensions: 447302
Number of successful extensions: 1230
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)