Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_B10
(875 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.013
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.040
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.053
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.12
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.38
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.66
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.87
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.7
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 27 2.7
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.5
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.013
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPP--XXGGXPXPPPXXQNXX 808
P P P PPP P PPPP P P PP GG P Q
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Query: 809 PP 814
P
Sbjct: 802 EP 803
Score = 34.3 bits (75), Expect = 0.023
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 626 IP*PDPXXPXXPPPPPXPXXXXXXPPPP 709
+P P P PPPPP P PPPP
Sbjct: 751 VPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 662 PPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPPXXXXPXPP 838
PPPP P P P P P P G P PPP P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPI-------PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +2
Query: 659 PPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPPXXXXPXP 835
PPPPP P P G P PP PPP PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-------PPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPP 790
P P P P P P PP P P P PP G PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGG-----PPPPPPPPGVAGAGPPPP 778
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.040
Identities = 18/66 (27%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +2
Query: 659 PPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXP-PPXXQNXXPPXXXXPXP 835
PPPPP P PP P P P P PP ++ PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 836 PXXNRP 853
+P
Sbjct: 371 STGRQP 376
Score = 33.5 bits (73), Expect = 0.040
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +2
Query: 626 IP*PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXG-GXPXPPPXXQN 802
IP P PPPPP PPP P AP P G P PP
Sbjct: 351 IPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP-APPPAIPGRSAPALPPLGNA 409
Query: 803 XXPPXXXXPXPP 838
P PP
Sbjct: 410 SRTSTPPVPTPP 421
Score = 32.7 bits (71), Expect = 0.071
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 7/62 (11%)
Frame = +2
Query: 626 IP*PDPXXPXXPP------PPPXPXXXXXXPPPPXXXXXXXXXPXGAP-XPPXXGGXPXP 784
+P P P PP PP P PP P P G P PP P P
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Query: 785 PP 790
PP
Sbjct: 477 PP 478
Score = 31.5 bits (68), Expect = 0.16
Identities = 19/73 (26%), Positives = 19/73 (26%)
Frame = +2
Query: 650 PXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPPXXXXP 829
P P PP P PP P P PP P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 830 XPPXXNRPXKKXP 868
PP P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 29.1 bits (62), Expect = 0.87
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +2
Query: 641 PXXPXXPP-PPPXPXXXXXXPPP--PXXXXXXXXXPXGAP-XPPXXGGXPXPPP-XXQNX 805
P P P PP P PP P P AP PP G P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 806 XPPXXXXPXP 835
PP P P
Sbjct: 475 APPPAPAPAP 484
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/80 (26%), Positives = 22/80 (27%), Gaps = 10/80 (12%)
Frame = +2
Query: 659 PPPPPXPXXXXXXPP----------PPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXX 808
PPPPP PP PP P PP P PPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP--PRSA 369
Query: 809 PPXXXXPXPPXXNRPXKKXP 868
P P P +R P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPP 389
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 629 P*PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPP 760
P P P P PP P PP P P AP P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.1 bits (72), Expect = 0.053
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -3
Query: 813 GGXXFCXXGGGXGXPPXXGGXGAPXGXXXXXXXXXGGGGXXXXXXGXGGGGGXXG 649
GG GG G PP GG G G G GG G GG G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG 241
Score = 30.3 bits (65), Expect = 0.38
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Frame = -3
Query: 837 GGXGXXXXGGXXFCXXGGGXGXPPXXGGXGAPXGXXXXXXXXXGG--GGXXXXXXGXGG- 667
GG G G F GG G GG G G GG GG G GG
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 666 GGGXXG 649
GGG G
Sbjct: 255 GGGPGG 260
Score = 29.9 bits (64), Expect = 0.50
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = -3
Query: 837 GGXGXXXXGGXXFCXXGGGXGXPPXXGGXGAPXGXXXXXXXXXGG-GGXXXXXXGXGGGG 661
GG G G GG G P G G P G GG GG G GGG
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGP--GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Query: 660 GXXG 649
G G
Sbjct: 266 GGHG 269
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.9 bits (69), Expect = 0.12
Identities = 20/70 (28%), Positives = 23/70 (32%)
Frame = +2
Query: 659 PPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPPXXXXPXPP 838
PPPP PPPP P P G PPP + P P PP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMP--PPPMHHEPGEHMPPPPMHH--EPGEHMPPPP 263
Query: 839 XXNRPXKKXP 868
+ P + P
Sbjct: 264 MHHEPGEHMP 273
Score = 31.9 bits (69), Expect = 0.12
Identities = 20/70 (28%), Positives = 23/70 (32%)
Frame = +2
Query: 659 PPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPPXXXXPXPP 838
PPPP PPPP P P G PPP + P P PP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMP--PPPMHHEPGEHMPPPPMHH--EPGEHMPPPP 315
Query: 839 XXNRPXKKXP 868
+ P + P
Sbjct: 316 MHHEPGEHMP 325
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/69 (26%), Positives = 20/69 (28%)
Frame = +2
Query: 662 PPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPPXXXXPXPPX 841
PPPP PPP P G PPP P P PP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE---PGEHMPPPPM 290
Query: 842 XNRPXKKXP 868
+ P + P
Sbjct: 291 HHEPGEHMP 299
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.38
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPP---PXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNX 805
P P PP P PPP P P GAP P G P P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP-PVPKPSVA 1100
Query: 806 XPP 814
PP
Sbjct: 1101 APP 1103
Score = 29.9 bits (64), Expect = 0.50
Identities = 20/78 (25%), Positives = 21/78 (26%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPP 814
P P PP P P P P AP P G P P P PP
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP-PVPKPSVAAPP 1151
Query: 815 XXXXPXPPXXNRPXKKXP 868
P +P P
Sbjct: 1152 VPAPSGAPPVPKPSVAAP 1169
Score = 29.5 bits (63), Expect = 0.66
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXP- 811
P P PP P P P P P GAP P P P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 812 PXXXXPXPP 838
P PP
Sbjct: 1143 PKPSVAAPP 1151
Score = 29.5 bits (63), Expect = 0.66
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAP--XPPXXGGXPXPPPXXQNXX 808
P P PP P P P P P AP P G P PPP
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV 1219
Query: 809 P-PXXXXPXPP 838
P P P P
Sbjct: 1220 PTPSAGLPPVP 1230
Score = 29.5 bits (63), Expect = 0.66
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGA-PXPPXXGGXPXPPPXXQNXXP 811
P P PP P P PPP G P PP P P P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Query: 812 PXXXXPXPP 838
P PP
Sbjct: 1230 PVPTAKAPP 1238
Score = 29.1 bits (62), Expect = 0.87
Identities = 19/78 (24%), Positives = 20/78 (25%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPP 814
P P PP P P P P P P G P P P PP
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPP 1132
Query: 815 XXXXPXPPXXNRPXKKXP 868
P +P P
Sbjct: 1133 VPVPSGAPPVPKPSVAAP 1150
Score = 29.1 bits (62), Expect = 0.87
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Frame = +2
Query: 626 IP*PDPXXPXXPPP----PPXPXXXXXXP-PPPXXXXXXXXXPXGAPXPPXXGGXPXPPP 790
+P P P P P PP P P P P P GAP P P P
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Query: 791 XXQNXXP-PXXXXPXPP 838
P P PP
Sbjct: 1154 APSGAPPVPKPSVAAPP 1170
Score = 29.1 bits (62), Expect = 0.87
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 5/83 (6%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPP 814
P P PP P P P P P GAP P P P + PP
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPV-PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 815 -----XXXXPXPPXXNRPXKKXP 868
P PP P P
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/77 (25%), Positives = 21/77 (27%), Gaps = 6/77 (7%)
Frame = +2
Query: 626 IP*PDPXXPXXPPP---PPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPX---XGGXPXPP 787
+P P P P P PP P PP P PP G P P
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK 1163
Query: 788 PXXQNXXPPXXXXPXPP 838
P P PP
Sbjct: 1164 PSVAAPPVPAPSSGIPP 1180
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/78 (23%), Positives = 19/78 (24%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPP 814
P P PP P P P P AP P P P PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 815 XXXXPXPPXXNRPXKKXP 868
P +P P
Sbjct: 1191 VPPPSEAPPVPKPSVGVP 1208
Score = 27.5 bits (58), Expect = 2.7
Identities = 22/83 (26%), Positives = 22/83 (26%), Gaps = 5/83 (6%)
Frame = +2
Query: 635 PDPXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGA--PXPPXXGGXPXPPP--XXQN 802
P P PP P P P P P P PP P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 803 XXPPXXXXPXP-PXXNRPXKKXP 868
PP P P P P P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.5 bits (58), Expect = 2.7
Identities = 21/84 (25%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Frame = +2
Query: 626 IP*PDPXXPXXPPP---PPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXX 796
+P P P PPP PP P PP P P P G P P
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST-------APPVPTPSAGLPPVPVPT 1233
Query: 797 QNXXPPXXXXPXPPXXNRPXKKXP 868
P P + P P
Sbjct: 1234 AKAPPVPAPSSEAPSVSTPRSSVP 1257
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/56 (25%), Positives = 16/56 (28%)
Frame = +2
Query: 668 PPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPPXXXXPXP 835
PP P PP P P + PP PP + P P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.66
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 8/84 (9%)
Frame = +2
Query: 641 PXXPXXPPP-----PPXPXXXXXXP---PPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXX 796
P P PPP PP P P PPP P AP P P PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP--SAVPPMPP-- 199
Query: 797 QNXXPPXXXXPXPPXXNRPXKKXP 868
+ PP P +RP P
Sbjct: 200 KVPPPPLSQAPVANTSSRPSSFAP 223
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 650 PXXPPPPPXPXXXXXXPPPP 709
P PPPPP P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Frame = +2
Query: 626 IP*PDPXXPXXPPPPPXPXXXXXXPP-PPXXXXXXXXXPXGAPXPP 760
IP P P PPP P PP P P P PP
Sbjct: 160 IPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.87
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 641 PXXPXXPPPPPXPXXXXXXPPPP 709
P P PPPPP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 746 APXPPXXGGXPXPPPXXQNXXPPXXXXPXPP 838
A PP G P PPP PP P PP
Sbjct: 2 ASLPP---GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 641 PXXPXXPPPPPXPXXXXXXPPPP 709
P PPPPP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 641 PXXPXXPPPPPXPXXXXXXPPPPXXXXXXXXXPXGAPXPPXXGGXPXPP 787
P P PPP P PPPP P P P P P
Sbjct: 1699 PPQMSAPTPPPPPMS---VPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +2
Query: 629 P*PDPXXPXXPPPP---PXPXXXXXXPPPP 709
P P P PPPP P P PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = +3
Query: 69 DKQHVPDQCISFCYDVLVTGVGRGESQFNSWL*IVNNLKHSCIFRE 206
++ H+ D IS YD+L V RG++ F + +++ +++ ++R+
Sbjct: 1047 ERTHLFDNYISHSYDLLAVFVHRGQASFGHYWTYIHDFENN-VYRK 1091
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 698 PPPPXXXXXXXXXPXGAPXPPXXGGXPXPPPXXQNXXPPXXXXPXPPXXNRP 853
PPPP P A PP G PP P P P P
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTP 959
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 659 PPPPPXPXXXXXXPPPP 709
PPPP P PPPP
Sbjct: 139 PPPPVRPNVMSQMPPPP 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,785,111
Number of Sequences: 5004
Number of extensions: 54751
Number of successful extensions: 310
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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