Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B10
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.6  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   8.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 122 NKHIIAKRNTLIGNMLFVANHXQDKNXNLKDS 27
           +KHI+ K  TLI N +      +  N N+ D+
Sbjct: 890 DKHILDKLPTLISNYIEAVKEGKFMNVNMLDT 921


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 641 PXXPXXPPPPP 673
           P  P  PPPPP
Sbjct: 338 PPKPAPPPPPP 348


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 302 FSILGCTYLQP*LIPRGN 249
           F   GC + Q  LIP+GN
Sbjct: 576 FDFCGCGWPQHMLIPKGN 593


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 227 RLGPVELFPKNAAVFEIIDDLEPAIKLRLSSTDT 126
           R+ P EL+ ++  V EI D+LE ++   LSS  T
Sbjct: 250 RITP-ELYSEHLVVPEIEDNLETSLFRPLSSEAT 282


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,341
Number of Sequences: 438
Number of extensions: 7279
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)