Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B09
         (938 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.85 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   7.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 46  IRLILIFCYFIWYLTTIIAI 105
           ++L+ +FCYFI YL T+  I
Sbjct: 141 LQLVFVFCYFI-YLFTVYYI 159


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +1

Query: 4   LFITXLTIGNSLRFIRLILIFCYFIWY----LTTIIAICDLFG 120
           LFI  + + NSLR +R  L   YF W     +T I+ +C LFG
Sbjct: 298 LFIL-IQLFNSLRRMRNDLERLYFYWSFALLITRIVCLC-LFG 338


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 595 PPPPPXPXXSPF 630
           PPPPP P    F
Sbjct: 731 PPPPPPPRVESF 742


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,303
Number of Sequences: 336
Number of extensions: 1273
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26375415
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)