Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_B09
(938 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.51
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 31 1.2
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 31 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 26 5.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 26 5.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 26 5.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 8.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 24 9.5
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/95 (24%), Positives = 25/95 (26%)
Frame = +3
Query: 336 PPXGGGXGXPXXKKXPPXAXXXPPLXXGXKXPPSGANXXXXXXXXXXXXXXXQTRHSXPP 515
PP G P PP A PP G PP + + PP
Sbjct: 247 PPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Query: 516 XXXXXXXXXXXXXXXXGXPPSPXQXXPPPPPXXXR 620
G PP PPPPP R
Sbjct: 303 PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 337
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 574 PPPXKXXPPPPPXPXXSP 627
PPP PPPPP P SP
Sbjct: 290 PPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/95 (24%), Positives = 25/95 (26%)
Frame = +3
Query: 336 PPXGGGXGXPXXKKXPPXAXXXPPLXXGXKXPPSGANXXXXXXXXXXXXXXXQTRHSXPP 515
PP G P PP A PP G PP + + PP
Sbjct: 268 PPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Query: 516 XXXXXXXXXXXXXXXXGXPPSPXQXXPPPPPXXXR 620
G PP PPPPP R
Sbjct: 324 PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 358
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 574 PPPXKXXPPPPPXPXXSP 627
PPP PPPPP P SP
Sbjct: 311 PPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/95 (24%), Positives = 25/95 (26%)
Frame = +3
Query: 336 PPXGGGXGXPXXKKXPPXAXXXPPLXXGXKXPPSGANXXXXXXXXXXXXXXXQTRHSXPP 515
PP G P PP A PP G PP + + PP
Sbjct: 253 PPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Query: 516 XXXXXXXXXXXXXXXXGXPPSPXQXXPPPPPXXXR 620
G PP PPPPP R
Sbjct: 309 PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 343
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 574 PPPXKXXPPPPPXPXXSP 627
PPP PPPPP P SP
Sbjct: 296 PPPRAGSPPPPPPPRGSP 313
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1
Query: 571 LPPPXKXXPPPPPXPXXSPF 630
LPPP PPPPP P SPF
Sbjct: 241 LPPPTTPPPPPPP-PAPSPF 259
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1
Query: 571 LPPPXKXXPPPPPXPXXSPF 630
LPPP PPPPP P SPF
Sbjct: 239 LPPPTTPPPPPPP-PAPSPF 257
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 574 PPPXKXXPPPPPXPXXSP 627
PPP PPPPP P SP
Sbjct: 69 PPPPMCPPPPPPMPSYSP 86
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 574 PPPXKXXPPPPPXPXXSP 627
PPP PPPPP P P
Sbjct: 58 PPPMCPPPPPPPPPPMCP 75
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 25.8 bits (54), Expect(2) = 5.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 550 GGXXXXXLPPPXKXXPPPPPXP 615
G LPP PPPPP P
Sbjct: 232 GAPPPPPLPPVGAGAPPPPPPP 253
Score = 21.4 bits (43), Expect(2) = 5.6
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1
Query: 385 PXRGXPPXSXXGKKXPPPXP 444
P G P + G PPP P
Sbjct: 221 PIGGIAPVNAHGAPPPPPLP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 25.8 bits (54), Expect(2) = 5.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 550 GGXXXXXLPPPXKXXPPPPPXP 615
G LPP PPPPP P
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPP 239
Score = 21.4 bits (43), Expect(2) = 5.6
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1
Query: 385 PXRGXPPXSXXGKKXPPPXP 444
P G P + G PPP P
Sbjct: 207 PIGGIAPVNAHGAPPPPPLP 226
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 25.8 bits (54), Expect(2) = 5.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 550 GGXXXXXLPPPXKXXPPPPPXP 615
G LPP PPPPP P
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPP 239
Score = 21.4 bits (43), Expect(2) = 5.8
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1
Query: 385 PXRGXPPXSXXGKKXPPPXP 444
P G P + G PPP P
Sbjct: 207 PIGGIAPVNAHGAPPPPPLP 226
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 544 PXGGXXXXXLPPPXKXXPPPPPXP 615
P G PPP PPPPP P
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 544 PXGGXXXXXLPPPXKXXPPPPPXP 615
P G PPP PPPPP P
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 544 PXGGXXXXXLPPPXKXXPPPPPXP 615
P G PPP PPPPP P
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPPPP 359
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 574 PPPXKXXPPPPPXPXXSP 627
PPP PPPPP P P
Sbjct: 67 PPPICPPPPPPPMPCPPP 84
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 574 PPPXKXXPPPPPXPXXS 624
PPP PPPPP P S
Sbjct: 76 PPPMPCPPPPPPMPRPS 92
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 571 LPPPXKXXPPPPPXP 615
+PPP PPPPP P
Sbjct: 1 MPPPPPPPPPPPPPP 15
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 574 PPPXKXXPPPPPXPXXS 624
PPP PPPPP P S
Sbjct: 4 PPPPPPPPPPPPPPAAS 20
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 571 LPPPXKXXPPPPPXP 615
+PPP PPPPP P
Sbjct: 1 MPPPPPPPPPPPPPP 15
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 574 PPPXKXXPPPPPXPXXS 624
PPP PPPPP P S
Sbjct: 4 PPPPPPPPPPPPPPAAS 20
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 24.2 bits (50), Expect(2) = 9.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 595 PPPPPXPXXSPF 630
PPPPP P +P+
Sbjct: 27 PPPPPPPKPAPY 38
Score = 22.2 bits (45), Expect(2) = 9.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 574 PPPXKXXPPPPPXP 615
PPP PPPPP P
Sbjct: 26 PPP----PPPPPKP 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,495,290
Number of Sequences: 27780
Number of extensions: 150565
Number of successful extensions: 2417
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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