Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_B08
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 116 2e-26
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 116 2e-26
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 99 3e-21
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 99 3e-21
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 99 3e-21
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 99 3e-21
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 98 6e-21
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 5.4
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 28 7.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 116 bits (279), Expect = 2e-26
Identities = 50/106 (47%), Positives = 68/106 (64%)
Frame = +1
Query: 226 RFRGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGNVVF 405
+ G ++GL G++GFH+HEKGD GC+S G H+NP HG P+D NRH+G LGN+
Sbjct: 54 KLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES 113
Query: 406 DENHYSRIXLVNVQISLSGSHGIIGRAVVXHEKTDDYGQSDHPDSK 543
+ + I + + SLSG + IIGR+VV HEKTDD G+ SK
Sbjct: 114 PASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSK 159
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 116 bits (279), Expect = 2e-26
Identities = 50/106 (47%), Positives = 68/106 (64%)
Frame = +1
Query: 226 RFRGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGNVVF 405
+ G ++GL G++GFH+HEKGD GC+S G H+NP HG P+D NRH+G LGN+
Sbjct: 54 KLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES 113
Query: 406 DENHYSRIXLVNVQISLSGSHGIIGRAVVXHEKTDDYGQSDHPDSK 543
+ + I + + SLSG + IIGR+VV HEKTDD G+ SK
Sbjct: 114 PASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSK 159
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 116 bits (279), Expect = 2e-26
Identities = 50/106 (47%), Positives = 68/106 (64%)
Frame = +1
Query: 226 RFRGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGNVVF 405
+ G ++GL G++GFH+HEKGD GC+S G H+NP HG P+D NRH+G LGN+
Sbjct: 54 KLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES 113
Query: 406 DENHYSRIXLVNVQISLSGSHGIIGRAVVXHEKTDDYGQSDHPDSK 543
+ + I + + SLSG + IIGR+VV HEKTDD G+ SK
Sbjct: 114 PASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSK 159
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/96 (45%), Positives = 60/96 (62%)
Frame = +1
Query: 235 GGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGNVVFDEN 414
G I GL PG +GFHVH+ GD + GC+S G HFNP K HG P RHVG LGNV +
Sbjct: 33 GEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD 92
Query: 415 HYSRIXLVNVQISLSGSHGIIGRAVVXHEKTDDYGQ 522
++I L + ++L G + ++GR++V H DD G+
Sbjct: 93 GVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGE 128
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/96 (45%), Positives = 60/96 (62%)
Frame = +1
Query: 235 GGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGNVVFDEN 414
G I GL PG +GFHVH+ GD + GC+S G HFNP K HG P RHVG LGNV +
Sbjct: 33 GEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD 92
Query: 415 HYSRIXLVNVQISLSGSHGIIGRAVVXHEKTDDYGQ 522
++I L + ++L G + ++GR++V H DD G+
Sbjct: 93 GVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGE 128
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/96 (45%), Positives = 60/96 (62%)
Frame = +1
Query: 235 GGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGNVVFDEN 414
G I GL PG +GFHVH+ GD + GC+S G HFNP K HG P RHVG LGNV +
Sbjct: 33 GEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD 92
Query: 415 HYSRIXLVNVQISLSGSHGIIGRAVVXHEKTDDYGQ 522
++I L + ++L G + ++GR++V H DD G+
Sbjct: 93 GVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGE 128
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/96 (45%), Positives = 60/96 (62%)
Frame = +1
Query: 235 GGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGNVVFDEN 414
G I GL PG +GFHVH+ GD + GC+S G HFNP K HG P RHVG LGNV +
Sbjct: 55 GEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD 114
Query: 415 HYSRIXLVNVQISLSGSHGIIGRAVVXHEKTDDYGQ 522
++I L + ++L G + ++GR++V H DD G+
Sbjct: 115 GVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGE 150
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 98.3 bits (234), Expect = 6e-21
Identities = 46/102 (45%), Positives = 62/102 (60%)
Frame = +1
Query: 217 EGPRFRGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGN 396
E F G I GL PG +GFH+H+ GD + GC S G HFNP +HG + V RHVG LGN
Sbjct: 47 EETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPHFNPCKMNHGGRDSVVRHVGDLGN 106
Query: 397 VVFDENHYSRIXLVNVQISLSGSHGIIGRAVVXHEKTDDYGQ 522
V + ++I + +SL G++ +IGR++V H DD GQ
Sbjct: 107 VEAGADGVAKIKFSDKVVSLFGANTVIGRSMVVHVDRDDLGQ 148
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 669 PXPPPPXXPXXPXXPPP 719
P PPPP P P PPP
Sbjct: 64 PPPPPPPPPMCPPPPPP 80
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 675 PPPPXXPXXPXXPPPXXXXXXXXXXXXXXHXPGXXGXLXPXSXGGXLXXPXP 830
PPPP P PPP P G L P S G P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 676 PPPPXXPXXXXXXPXXXPPXXXXXXXXXXTPPGGXGXXLPXXGGGXXXXP 825
PPPP P P PP PP G P GG P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 675 PPPPXXPXXPXXPPPXXXXXXXXXXXXXXHXPGXXGXLXPXSXGGXLXXPXP 830
PPPP P PPP P G L P S G P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 676 PPPPXXPXXXXXXPXXXPPXXXXXXXXXXTPPGGXGXXLPXXGGGXXXXP 825
PPPP P P PP PP G P GG P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 675 PPPPXXPXXPXXPPPXXXXXXXXXXXXXXHXPGXXGXLXPXSXGGXLXXPXP 830
PPPP P PPP P G L P S G P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 676 PPPPXXPXXXXXXPXXXPPXXXXXXXXXXTPPGGXGXXLPXXGGGXXXXP 825
PPPP P P PP PP G P GG P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/83 (30%), Positives = 28/83 (33%), Gaps = 6/83 (7%)
Frame = +1
Query: 136 HHAVSRHCRSIHRND*RQHHVHPGSRWEG---PRFRGGITGLPPGEYGFHVHEKGDLSG- 303
HHA + H H HH H S G P G GE+G H G G
Sbjct: 568 HHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHG-----HHGEHGVHHGHHGAGYGA 622
Query: 304 --GCVSTGSHFNPEHKDHGHPND 366
G H P H+ H H D
Sbjct: 623 HHGHHGAHHHHAPHHEHHEHHGD 645
Score = 28.3 bits (60), Expect = 7.2
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Frame = +1
Query: 118 DGSSRLHHAVSRHCRSIHRND*RQHHVHPGSR---WEGPRFRGGITGLPPGEYGFHVHEK 288
DG+ H H + H ++ HH H G P G G G +G H H
Sbjct: 378 DGAHHEHKEGEHHEHAAHHDEHGVHHRHHGEHHGTHHSPAHHGE-HGTHHGHHGEHHHAP 436
Query: 289 GDLSGGCVSTG-SHFNPEHKDHGH 357
G S G H +P H HGH
Sbjct: 437 AH-HGHHESHGHGHHSPAH--HGH 457
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/88 (27%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Frame = +1
Query: 136 HHAVSRHCRSIHRND*RQHHVHPGSRWEGPRFRG--GITGLPPGEYGFHVHEKGDLSGGC 309
HH+ + H + HH H G P G G G G +G H G
Sbjct: 449 HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHG- 507
Query: 310 VSTGSHFNPEHKDHGHPNDVNRHVGXLG 393
H P H HGH + H G G
Sbjct: 508 ---EHHHAPAH--HGHHGEHGTHHGHHG 530
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 88 TNIPGCDRSGDGSSRLHHAVSRHCRSIHRND*RQHHVH 201
TN+ G SR H S H RSI R++ R HH H
Sbjct: 429 TNVRVPSSRGSAISRAH---SEHRRSIDRSEPRHHHRH 463
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 718 GGGXXGXXGXXGGGGXGXXFLKKKK 644
GGG G G GGGG G +KK+
Sbjct: 171 GGGGGGGCGGGGGGGCGGGCGRKKR 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,794,866
Number of Sequences: 27780
Number of extensions: 353661
Number of successful extensions: 1889
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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