Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B06
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical ...    32   0.46 
U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ...    31   1.1  
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z81453-3|CAB03791.1|  480|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical
            protein F14D2.6 protein.
          Length = 998

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +3

Query: 417  VIVIHKDLPIDNLDQLKGLKSCHTGVNRNVGY-KIPLTMLMKRAVFPKMNXHSISPKENE 593
            ++V+     ++NLD L+ L+   +  N      ++    L++   FPK+     SPK N 
Sbjct: 843  LLVVKSTAKLENLDFLENLEQIVSLENSTSPIIQLSSNKLLQNVNFPKIKTPLFSPKNNH 902

Query: 594  LRALVDVLHEILAS*VNGLRIRKQT 668
               +VD   EI+ S ++  +++  T
Sbjct: 903  YIEIVDNKQEIIYSQMSCFKLQNLT 927


>U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical
           protein ZK742.2 protein.
          Length = 594

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +2

Query: 479 LSYWS*QKRGIQDPSNNADEACSFPKNERXQHFAEGKRTKSLGRRSSRNLGIVGKWSPDP 658
           L YW  +++ ++ P NNAD  C        +    GK  +S+   + R    +GK +PD 
Sbjct: 411 LKYWGEERKDVEVPKNNAD--CHRFWRSADEGTVAGKAQQSI--YTQRQYTFIGK-APDN 465

Query: 659 KTNSAWKAQYNKLC 700
           +     K +  KLC
Sbjct: 466 RKVCLAKMKSGKLC 479


>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
           protein C36B7.5b protein.
          Length = 1148

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = -3

Query: 345 WVFWRP-----RTCLPGRLERNRLASAERNSDTPFYLWRECSLV*PW-IWSEY 205
           W  W P      TC  G ++RNR+    RN D P      C  + P   WS +
Sbjct: 351 WTLWSPWSLCTATCGVGEIQRNRVCQTGRNCDGPSVEVEACKALLPCPTWSSW 403


>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
           protein C36B7.5a protein.
          Length = 1121

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = -3

Query: 345 WVFWRP-----RTCLPGRLERNRLASAERNSDTPFYLWRECSLV*PW-IWSEY 205
           W  W P      TC  G ++RNR+    RN D P      C  + P   WS +
Sbjct: 351 WTLWSPWSLCTATCGVGEIQRNRVCQTGRNCDGPSVEVEACKALLPCPTWSSW 403


>Z81453-3|CAB03791.1|  480|Caenorhabditis elegans Hypothetical
           protein B0250.4 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 659 KTNSAWKAQYNKLCSMCE 712
           KTN+ W   YNK CS  E
Sbjct: 173 KTNTVWNKNYNKFCSFKE 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,446,795
Number of Sequences: 27780
Number of extensions: 497446
Number of successful extensions: 1409
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)