Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B05
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    27   0.25 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   2.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   4.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   4.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   4.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   7.2  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   7.2  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   7.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.5  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   9.5  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
 Frame = +1

Query: 262 FSYSIDNDEDSSATARYNLDTKK-FTTI----EGVNNGFAQTVDPTTQTVYIGGSDG-LY 423
           F Y  +N +    + R+NL   K F  +    +    G    +DP+ + V+IGG+ G L 
Sbjct: 117 FPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGTTGKLR 176

Query: 424 RYDXDTKRAELIGASSINIWTIFYKDVLYF-STYP 525
           R      R+ L           FY+ +  F   YP
Sbjct: 177 RRSTAASRSRLAAFKRTIALGAFYQPLQPFPPPYP 211


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 790 PPXVGPKKNCNPWINPF 840
           P    P   C+PW NP+
Sbjct: 25  PAYSPPPSYCDPWYNPY 41


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 568 PGDLTRLKTCREC 530
           PG+  RL TC EC
Sbjct: 497 PGETLRLFTCMEC 509


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 568 PGDLTRLKTCREC 530
           PG+  RL TC EC
Sbjct: 504 PGETLRLFTCMEC 516


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 479 YGPYSTKTCCISQRTPHTFSTRFQTGQI 562
           Y   + K C + +R PH +  RF+  +I
Sbjct: 221 YQNATRKVCGVWKRIPHDYRKRFRMEKI 248


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 427 IDIDRRFRLCTRSAWL 380
           ID+D + ++ T +AWL
Sbjct: 41  IDVDEKNQILTTNAWL 56


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 427 IDIDRRFRLCTRSAWL 380
           ID+D + ++ T +AWL
Sbjct: 41  IDVDEKNQILTTNAWL 56


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 427 IDIDRRFRLCTRSAWL 380
           ID+D + ++ T +AWL
Sbjct: 41  IDVDEKNQILTTNAWL 56


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 732 FKANLFTPEFSNTXYKPGS 676
           F    FT   SNT Y PG+
Sbjct: 268 FYGRTFTLSNSNTNYNPGT 286


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 562 DLTRLKTCRECVRGTLR 512
           DL  LK  + C++ TLR
Sbjct: 40  DLQELKYTKRCIKETLR 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,929
Number of Sequences: 336
Number of extensions: 3873
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)