Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_B05
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038611-1|AAB92038.2| 136|Caenorhabditis elegans Hypothetical ... 31 0.80
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 29 3.2
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 29 3.2
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 29 3.2
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 29 3.2
Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 28 9.8
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 28 9.8
AF016448-17|AAB65962.1| 656|Caenorhabditis elegans Hypothetical... 28 9.8
>AF038611-1|AAB92038.2| 136|Caenorhabditis elegans Hypothetical
protein E04A4.3 protein.
Length = 136
Score = 31.5 bits (68), Expect = 0.80
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 470 VLTYGPYSTKTCCISQRTPHTFSTRFQTGQITRXPDLXD 586
V+ + P K QRT H T+F+TG ITR +L D
Sbjct: 71 VVRHEPVYGKFQLFGQRTTHVKCTQFETGWITRHVELLD 109
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 196 MLYENLDRPYLLTVDYSTNDLYFSYSIDNDEDSSATARYNLDTKKFTTIEGVNNGFAQTV 375
+L L+ P L +DY +D+YF D + R N+DTK+ + ++NG
Sbjct: 554 LLDNKLEVPSALAIDYIRHDVYF-----GDVERQLIERVNIDTKERRVV--ISNGVHHPY 606
Query: 376 D 378
D
Sbjct: 607 D 607
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 196 MLYENLDRPYLLTVDYSTNDLYFSYSIDNDEDSSATARYNLDTKKFTTIEGVNNGFAQTV 375
+L L+ P L +DY +D+YF D + R N+DTK+ + ++NG
Sbjct: 554 LLDNKLEVPSALAIDYIRHDVYF-----GDVERQLIERVNIDTKERRVV--ISNGVHHPY 606
Query: 376 D 378
D
Sbjct: 607 D 607
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 196 MLYENLDRPYLLTVDYSTNDLYFSYSIDNDEDSSATARYNLDTKKFTTIEGVNNGFAQTV 375
+L L+ P L +DY +D+YF D + R N+DTK+ + ++NG
Sbjct: 554 LLDNKLEVPSALAIDYIRHDVYF-----GDVERQLIERVNIDTKERRVV--ISNGVHHPY 606
Query: 376 D 378
D
Sbjct: 607 D 607
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 196 MLYENLDRPYLLTVDYSTNDLYFSYSIDNDEDSSATARYNLDTKKFTTIEGVNNGFAQTV 375
+L L+ P L +DY +D+YF D + R N+DTK+ + ++NG
Sbjct: 554 LLDNKLEVPSALAIDYIRHDVYF-----GDVERQLIERVNIDTKERRVV--ISNGVHHPY 606
Query: 376 D 378
D
Sbjct: 607 D 607
>Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical
protein T05E11.6 protein.
Length = 319
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 199 LYENLDRPYLLTVDYS-TNDLYFSYSIDNDEDSSATARYNLDTKKFTTIE 345
+YE +D P +L++ S T++ +SY +D D RY T F T E
Sbjct: 203 MYEWIDSPNVLSLSSSLTHEESYSYDVDTDIGVYVIDRYTHYTVNFLTKE 252
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 479 YGPYSTKTCCISQRTPHTFSTRFQTGQITRXPDLXDPKVNXXIIXHDD 622
+GP+ T CIS + + ST + G PD + K+ ++ D
Sbjct: 799 FGPWETALSCISGQFTNDSSTYYVVGTGLIYPDETETKIGRIVVFEVD 846
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 201 EHLLFVRHPVDFDAFALPSEGSRLSHDYACH*QEQLHFDHVFLR 70
+HL RH DFD LP + + A H + +H+F+R
Sbjct: 208 KHLRRHRHEDDFDELPLPKNERKTTTVAATHSEIMNEMEHLFVR 251
>AF016448-17|AAB65962.1| 656|Caenorhabditis elegans Hypothetical
protein F41E6.14 protein.
Length = 656
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 2/102 (1%)
Frame = +1
Query: 211 LDRPYLLTVDYSTNDLYFSYSIDNDEDSSATARYNLDTKKFT--TIEGVNNGFAQTVDPT 384
+D PY +T+DY + S + + + ++ + T +N +
Sbjct: 540 IDLPYYVTIDYPAKLMARSLIYRKNLEEKLAVNFKTVNRQLSDQTDRLLNANCSNCQFND 599
Query: 385 TQTVYIGGSDGLYRYDXDTKRAELIGASSINIWTIFYKDVLY 510
Q GSD Y ++ DT +A S + + Y + +Y
Sbjct: 600 IQKALTNGSDKFYLFEKDTYKALTYDGSHLTLTGFKYIEPIY 641
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,265,128
Number of Sequences: 27780
Number of extensions: 369947
Number of successful extensions: 881
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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