Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B04
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    30   2.8  
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006...    29   3.6  
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365...    29   4.8  
02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544     28   8.4  

>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +1

Query: 295 IEEAKPNGALDEVF-KKYCDKSAQLKGCISSVLQGVRPCVGNDYANHINDAQNSTNQLID 471
           I+ A P+G   + F KK    + Q    +S ++Q +      DY    N+A+ +TN L+D
Sbjct: 421 IDNASPSGFNTQAFLKKRSRATNQPVESMSMIMQFIETQGFLDYLERCNNAEENTNNLLD 480


>03_06_0476 +
           34199577-34199638,34200267-34200397,34200535-34200698,
           34201007-34201117,34201308-34201387,34201489-34201639,
           34201736-34201829,34202421-34202509,34203672-34203745,
           34203859-34204021,34204445-34204530,34205011-34205094,
           34205186-34205366,34205837-34205887
          Length = 506

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
 Frame = +1

Query: 154 FSQITAVVTSQCTKNNA---ED---KVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 315
           FSQ T V+ +Q  + +    +D   K   V  A R++G  L GLV ++V +  + E+KP+
Sbjct: 109 FSQFTVVIATQLPERSLLKLDDICRKANIVLVAARSYG--LTGLVRISVKEHNVIESKPD 166

Query: 316 GALDEV 333
             LD++
Sbjct: 167 HFLDDL 172


>07_03_0111 +
           13535912-13535972,13536081-13536142,13536418-13536510,
           13537577-13537649,13537876-13538265,13538337-13538404,
           13539334-13539375,13540211-13540735,13540817-13540974,
           13541078-13541636,13542438-13542500,13542579-13542680,
           13542779-13543096,13543175-13543267,13543489-13543590,
           13543678-13543782,13544190-13544323,13545097-13545280,
           13545701-13545832,13546215-13546327,13546468-13546558,
           13547138-13549339
          Length = 1889

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 850 GSFNFCDGTSIXRERKXX-GCNQSXLGRSXVAKGESLRMNLIXDSA 716
           G  + CDGTS    +K      Q   G S  ++ ESL  +L+ DSA
Sbjct: 618 GEKSMCDGTSSAESQKFKPSAVQLPQGESNASENESLLKDLLSDSA 663


>02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544
          Length = 360

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -3

Query: 625 KAQVXGGIPQWGSSVSNLKSMS*DSQSFAGSTQGRLXR*TKQSGL 491
           K Q+ G IPQ    + NLK++S  S +F GS    L   TK + L
Sbjct: 231 KNQLSGHIPQELGYLVNLKNLSLYSNNFTGSIPNCLGNLTKLTDL 275


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,720,953
Number of Sequences: 37544
Number of extensions: 433087
Number of successful extensions: 1054
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)