Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B02
         (894 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D575AF Cluster: PREDICTED: similar to CG32782-PD...    57   7e-07
UniRef50_Q4SAY7 Cluster: Chromosome undetermined SCAF14678, whol...    33   7.4  

>UniRef50_UPI0000D575AF Cluster: PREDICTED: similar to CG32782-PD,
           isoform D; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG32782-PD, isoform D - Tribolium castaneum
          Length = 762

 Score = 56.8 bits (131), Expect = 7e-07
 Identities = 27/32 (84%), Positives = 30/32 (93%), Gaps = 1/32 (3%)
 Frame = +2

Query: 116 MSAGSQIQMAPQTTVN-TGQPLHSQDSNMSTG 208
           MSAGSQIQMAPQ+T+N T QP+HSQDSNMSTG
Sbjct: 50  MSAGSQIQMAPQSTINTTHQPVHSQDSNMSTG 81



 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = +3

Query: 414 SSDKNIREXFXXHPSSSPVRHAGAKSPRPQGAXXPMYPP 530
           +SDK I + F  H  +SP+RH GAKSP PQ    PM+PP
Sbjct: 125 TSDKKINDYFK-HSGNSPIRHGGAKSPSPQQTPYPMFPP 162


>UniRef50_Q4SAY7 Cluster: Chromosome undetermined SCAF14678, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14678, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 735

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
 Frame = +3

Query: 441 FXXHPSSSPVRHAGAKSPRPQGAXXPMYPPLTFIT-YCQQLTSCE-PASQPRPSPXXXTX 614
           F  HPS+ P+  +G + PRP  +  P  P     T     LT  E  AS P P P     
Sbjct: 297 FALHPSTRPLTTSGYQIPRPASSPQPRPPRRPSSTPSVDSLTQAELLASTPTPPPRPPKP 356

Query: 615 XXTXMTXSDG 644
                T  DG
Sbjct: 357 TSITTTQGDG 366


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,728,902
Number of Sequences: 1657284
Number of extensions: 9411133
Number of successful extensions: 25259
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25204
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)