Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_B02
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   7.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.9  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   9.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 115 YVSWFTNSDGTTNYCQHGATATQSGLQYE 201
           YV W +     TN C++ AT  Q+  QY+
Sbjct: 99  YVDWCS-----TNPCENQATCVQNKNQYQ 122


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 106 HVIYVSWFTNSDGTTNYCQH 165
           HVI +  +T  DGT  +  H
Sbjct: 215 HVITILDWTKEDGTDKFMSH 234


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 518 YVPTAHLHHLLPAADF 565
           YV  AH HH   AA F
Sbjct: 4   YVSAAHHHHQAAAAAF 19


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 518 YVPTAHLHHLLPAADF 565
           YV  AH HH   AA F
Sbjct: 63  YVSAAHHHHQAAAAAF 78


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 518 YVPTAHLHHLLPAADF 565
           YV  AH HH   AA F
Sbjct: 4   YVSAAHHHHQAAAAAF 19


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 518 YVPTAHLHHLLPAADF 565
           YV  AH HH   AA F
Sbjct: 63  YVSAAHHHHQAAAAAF 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,056
Number of Sequences: 336
Number of extensions: 2274
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)