Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_B01
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40951-4|AAG01568.1| 756|Caenorhabditis elegans Temporarily ass... 35 0.080
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.14
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.14
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.14
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.3
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 28 7.0
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 28 7.0
Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical pr... 28 9.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 9.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.2
>U40951-4|AAG01568.1| 756|Caenorhabditis elegans Temporarily
assigned gene nameprotein 130 protein.
Length = 756
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 421 FLYVLXYIMQXLXYIXNYYKNTTVIAFIXVIKYTCAXIYF 540
F+Y++ YI+ + Y K + F VI +TCA I F
Sbjct: 651 FIYIIYYILMKMIYREKIPKRAIALLFAAVISWTCAGILF 690
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 703 PPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
PP G PPPP PPP PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 703 PPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
PP G PPPP PPP PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P P G PPPP PPP PPPP
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P PP G PPPP PPP P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 4/44 (9%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXP----PPP 813
P PP G PPPP PPP P PPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P P G PPPP PPP PPP
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 703 PPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
PP G PPPP PPP PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 703 PPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
PP G PPPP PPP PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P P G PPPP PPP PPPP
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P PP G PPPP PPP P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 4/44 (9%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXP----PPP 813
P PP G PPPP PPP P PPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P P G PPPP PPP PPP
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 703 PPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
PP G PPPP PPP PPPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 703 PPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
PP G PPPP PPP PPPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P P G PPPP PPP PPPP
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P PP G PPPP PPP P P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 4/44 (9%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXP----PPP 813
P PP G PPPP PPP P PPP
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P P G PPPP PPP PPP
Sbjct: 315 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 31.1 bits (67), Expect = 0.99
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 812 GGGGCXXXXXXGGGXXXXXXXXXXGGGGXXXPXXXGGXXG 693
GGGGC GGG GGGG GG G
Sbjct: 86 GGGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCG 125
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 0.99
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P PP G PPPP PPP PPPP
Sbjct: 84 PPPPPMFAGGIPPPPP---MMGGIPPPPPMFGAPPPPPPP 120
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P PP PPP PPP PPPP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP 300
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P PP PPP PPP PPPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Frame = +1
Query: 703 PPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXP---PPP 813
PP G PPPP PPP P PPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 366
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P PP PPP PPP PPPP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP 310
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P PP PPP PPP PPPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Frame = +1
Query: 703 PPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXP---PPP 813
PP G PPPP PPP P PPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 376
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 694 PXSPPXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P PP P PP PPP PPPP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 85 NFEFSGT-IXFR*NEFCTYFELRLRVGAGSRRGQRCSRAQVEALQEN*ESGTQRSRWINQ 261
+F++ G I N YF +R R+ G++RG+R S + + E + G +++ N+
Sbjct: 624 HFQYIGDKIGLTANFVSNYFTIRKRMSKGAKRGERLSDSDDDD-DEPEDDGEEKNEEKNE 682
Query: 262 SGSSYSRHRASK 297
+ + +A K
Sbjct: 683 EEARKAAEKAEK 694
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 85 NFEFSGT-IXFR*NEFCTYFELRLRVGAGSRRGQRCSRAQVEALQEN*ESGTQRSRWINQ 261
+F++ G I N YF +R R+ G++RG+R S + + E + G +++ N+
Sbjct: 622 HFQYIGDKIGLTANFVSNYFTIRKRMSKGAKRGERLSDSDDDD-DEPEDDGEEKNEEKNE 680
Query: 262 SGSSYSRHRASK 297
+ + +A K
Sbjct: 681 EEARKAAEKAEK 692
>Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical
protein C47E12.1 protein.
Length = 487
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 295 CLPYDGYSWTRFD*SIANVASHF 227
C P D SWT FD I N S++
Sbjct: 330 CSPNDNESWTLFDEMIGNAESYY 352
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 706 PXXXGXXXPPPPXXXXXXXXXXPPPXXXXXXXPPPP 813
P G PPPP PP PPPP
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Frame = +1
Query: 691 APXSPPXXXGXXXPPPP--XXXXXXXXXXPPPXXXXXXXPPPP 813
A SPP PPPP PPP PPPP
Sbjct: 260 AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Frame = +1
Query: 691 APXSPPXXXGXXXPPPP--XXXXXXXXXXPPPXXXXXXXPPPP 813
A SPP PPPP PPP PPPP
Sbjct: 281 AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Frame = +1
Query: 691 APXSPPXXXGXXXPPPP--XXXXXXXXXXPPPXXXXXXXPPPP 813
A SPP PPPP PPP PPPP
Sbjct: 266 AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,959,810
Number of Sequences: 27780
Number of extensions: 223031
Number of successful extensions: 1040
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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