Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A22
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0587 + 15859009-15859070,15860022-15860103,15860603-158607...    31   1.2  
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322...    31   1.6  
05_01_0279 - 2159503-2159617,2159785-2159864,2159981-2160064           28   8.5  

>05_03_0587 +
           15859009-15859070,15860022-15860103,15860603-15860785,
           15861522-15861719,15861858-15862004,15862485-15862856
          Length = 347

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +2

Query: 125 CSTKAEHIKTKNVDAVFVEKQKKI--LSFFQDV 217
           C+ + E+I TKN DA+   +Q+++  + +F D+
Sbjct: 87  CNNRQENISTKNTDAIVTSQQQEVAGIKYFDDI 119


>11_01_0419 +
           3226224-3226756,3228010-3228169,3228256-3228435,
           3228525-3228659,3229262-3229344,3229442-3229535,
           3229649-3229735
          Length = 423

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -3

Query: 589 IHKHFRVYFIRSRNHETVAIRALDNSDVGGHTRLTLIEMHT 467
           IHK FR++  R  + E +AIRA  NS +     L L +M T
Sbjct: 319 IHKPFRIHLGRGLHGECLAIRADGNSKLSHEIGLELSKMST 359


>05_01_0279 - 2159503-2159617,2159785-2159864,2159981-2160064
          Length = 92

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/45 (28%), Positives = 28/45 (62%)
 Frame = +3

Query: 399 LLYSIYSITLRTLKRSTRLPVLRVCISIKVNLVCPPTSLLSSALI 533
           ++Y+IY+IT   L+ ++ +  + VC+    N +C   S+LS+ ++
Sbjct: 46  IIYAIYAITKDGLQTASSIFSIAVCLLEFGNDICIQNSVLSAPIL 90


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,220,195
Number of Sequences: 37544
Number of extensions: 357929
Number of successful extensions: 697
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)