Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A21
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    30   2.4  
Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical pr...    25   6.9  
AL023838-4|CAA19504.1|  218|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 705 RGERXTRYSGKRPGFGNQEXGTRGASRGKRXGIF 604
           RG+  T   G+R G+G +  G  G  RG+  G+F
Sbjct: 797 RGKSGTSGFGQRGGYGGRGGGFGGTGRGRGGGVF 830


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +1

Query: 622 PPGSS-PRAALLVPEPWPLTGIPGPPFSPSGKRXAFLIPXXVRISLXGVGRSAXXLGLCA 798
           PPG S P+ +  +P P P   IP PP  P G      IP    +   G+      +G   
Sbjct: 53  PPGQSIPKPSFFIPPPVPNGFIPPPP-GPGG------IPPPPPMFAGGIPPPPPMMGGIP 105

Query: 799 PNPPL 813
           P PP+
Sbjct: 106 PPPPM 110


>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
           protein Y59A8B.1a protein.
          Length = 1641

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
 Frame = +1

Query: 601 YKDTXPFPPGSSPRAALLVPEP-----WPLTGIPGPPFSP 705
           Y+D  P PP   P   L   EP     W  +GIP PP  P
Sbjct: 198 YRDRLPPPPPKPPMPDLRTKEPIGIRSWNGSGIPPPPILP 237


>Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical
           protein F45B8.3 protein.
          Length = 241

 Score = 24.6 bits (51), Expect(2) = 6.9
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +1

Query: 601 YKDTXPFPPGSSPRAALLVPEPWPLTGIPGPP 696
           Y    P PP   P +    P P P    P PP
Sbjct: 83  YVPPAPLPPPPPPASPCCGPSPVPAPCCPPPP 114



 Score = 22.2 bits (45), Expect(2) = 6.9
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 793 CAPNPPLQARTACPLYP 843
           C P PP  A   CP  P
Sbjct: 109 CCPPPPAPAAPCCPPPP 125


>AL023838-4|CAA19504.1|  218|Caenorhabditis elegans Hypothetical
           protein Y43C5A.4 protein.
          Length = 218

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
 Frame = +1

Query: 457 KEHVSKRP-AKGQEP*KGRVAGVFXXXXXXXRASQKSTLKS--EVAXPDQDYKDTXPFPP 627
           KE  SKRP AK ++  K   +            S+K T     +   PD   KD    PP
Sbjct: 89  KEKSSKRPTAKSKKSKKATGSKKKNKKTKKPDGSEKKTQTQTEDQKAPDSPKKDDFFAPP 148

Query: 628 GSSPRAALLVPEPWPLTGIPGPP 696
           G+      +  EP P   +P  P
Sbjct: 149 GAPDPVPAVPVEPSPAPPVPAVP 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,434,540
Number of Sequences: 27780
Number of extensions: 358932
Number of successful extensions: 1070
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)