Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_A18
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 255 4e-68
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 251 5e-67
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 238 4e-63
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 148 7e-36
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 109 4e-24
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 104 8e-23
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 102 4e-22
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 100 1e-21
03_01_0034 + 318432-318825,318902-319851 100 2e-21
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 100 3e-21
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 96 3e-20
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 90 2e-18
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 85 5e-17
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 1.6
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 2.1
02_05_0724 + 31239139-31239382,31239477-31239798,31239895-31240204 30 2.8
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 3.7
08_01_0312 + 2764744-2767390,2767632-2767990 29 4.9
05_05_0215 - 23352363-23352666,23353183-23353495,23353590-23353713 29 4.9
01_06_0347 + 28592552-28593502 29 6.5
03_05_0246 + 22333172-22333417 28 8.6
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 8.6
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 8.6
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 255 bits (624), Expect = 4e-68
Identities = 123/172 (71%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
HVPRAVFVDLE TV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARG H+ G
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARG--HYTIGKEIVDLC 118
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
L + GLQGFL+F++ GG G LL+ERLSVDYGKKSKL F
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGGTGS-GLGSLLLERLSVDYGKKSKLGF 169
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 251 bits (615), Expect = 5e-67
Identities = 121/172 (70%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
HVPRAVFVDLE TV+DEVRTG YRQLFHPEQLI GKEDAANN+ARG H+ G
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARG--HYTIGKEIVDLC 118
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
L + GLQGFL+F++ GG G LL+ERLSVDYGKKSKL F
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGGTGS-GLGSLLLERLSVDYGKKSKLGF 169
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 238 bits (583), Expect = 4e-63
Identities = 115/172 (66%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
HVPRA+FVDLE TV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARG H+ G
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARG--HYTVGKEIVDLC 118
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
L + GLQGFL+F++ GG G LL+ERLSVDYGKKSKL F
Sbjct: 119 LDRVRKLADNCTGLQGFLVFNAVGGGTGS-GLGSLLLERLSVDYGKKSKLGF 169
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 148 bits (358), Expect = 7e-36
Identities = 80/135 (59%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
Frame = +3
Query: 255 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKE 434
+D T G D+FNTFFSET +GKHVPRA+FVDLE TV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 435 DAANNYARGSLHHWKGNRRFGFGQKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLM 611
DAANN+ARG H+ G L + GLQGFL+F++ GG G LL+
Sbjct: 158 DAANNFARG--HYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGS-GLGSLLL 214
Query: 612 ERLSVDYGKKSKLEF 656
ERLSVDYG+KSKL F
Sbjct: 215 ERLSVDYGRKSKLGF 229
Score = 81.4 bits (192), Expect = 9e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 109 bits (261), Expect = 4e-24
Identities = 63/178 (35%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Frame = +3
Query: 126 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 305
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 306 ETGAGKHVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGN 485
E G+ VPRAV +DLE +D VRTG Y Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKG--HYTEGA 290
Query: 486 RRF-GFGQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
+ LQGF + HS GG G LL+ ++ +Y + L F
Sbjct: 291 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGS-GMGTLLISKIREEYPDRMMLTF 347
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 104 bits (250), Expect = 8e-23
Identities = 62/175 (35%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 314
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 315 AGKHVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRF 494
G+ VPRAV +DLE +D VRTG Y Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKG--HYTEGAELI 113
Query: 495 -GFGQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
+ LQGF + HS GG G LL+ ++ +Y + L F
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGS-GMGTLLISKIREEYPDRMMLTF 167
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 102 bits (244), Expect = 4e-22
Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRF-GF 500
+VPRAV +DLE +D VR+G Y Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKG--HYTEGAELIDSV 116
Query: 501 GQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
+ LQGF + HS GG G LL+ ++ +Y + L F
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGS-GMGTLLISKIREEYPDRMMLTF 167
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 100 bits (240), Expect = 1e-21
Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRF-GF 500
+VPRAV +DLE +D VR+G + Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG--HYTEGAELIDSV 116
Query: 501 GQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
+ LQGF + HS GG G LL+ ++ +Y + L F
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGS-GMGTLLISKIREEYPDRMMLTF 167
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 100 bits (239), Expect = 2e-21
Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 1/172 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRF-GF 500
VPRAV +DLE +D VR+G Y +F P+ + G+ A NN+A+G H+ +G
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKG--HYTEGAELIDAV 116
Query: 501 GQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
+ LQGF + HS GG G LL+ ++ +Y + L F
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGS-GMGTLLISKIREEYPDRMMLTF 167
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 99.5 bits (237), Expect = 3e-21
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRF-GF 500
VPRAV +DLE +D VR+G + Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG--HYTEGAELIDSV 116
Query: 501 GQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
+ LQGF + HS GG G LL+ ++ +Y + L F
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGS-GMGTLLISKIREEYPDRMMLTF 167
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 96.3 bits (229), Expect = 3e-20
Identities = 46/113 (40%), Positives = 67/113 (59%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 482
VPRAV +DLE +D VRTG Y Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKG--HYTEG 109
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 90.2 bits (214), Expect = 2e-18
Identities = 44/113 (38%), Positives = 64/113 (56%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 482
HVPRAV +DLE +D +R+G +F P+ + G+ A NN+A+G H+ +G
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKG--HYTEG 109
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 85.4 bits (202), Expect = 5e-17
Identities = 58/168 (34%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Frame = +3
Query: 147 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 326
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 327 VPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGSLHHWKGNRRFGF 500
+PRA+ VDLE V++ ++ YR L++ E + + A NN+A G +H
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG--YHQGEQVVDDI 118
Query: 501 GQKSASSLXSVPGLQGFLIFHSF-GGRYRLWGSLPLLMERLSVDYGKK 641
L+GF++ HS GG GS L+E L+ Y KK
Sbjct: 119 MDMIDREADGSDSLEGFVLCHSIAGGTGSGMGS--YLLETLNDRYSKK 164
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 283 SSPPPMVLSVGIWPSGWMPCSR 218
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 280 SPPPMVLSVGIWPSGWMPCSR 218
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>02_05_0724 + 31239139-31239382,31239477-31239798,31239895-31240204
Length = 291
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = -3
Query: 544 CRPGTLXSELADFCPKPNLRFPFQ---WCSDPRA 452
C PG++ +FCP PN P WC+ PRA
Sbjct: 131 CLPGSVVVTATNFCP-PNNALPSDDGGWCNPPRA 163
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 277 PPPMVLSVGIWPSGWMPCSR 218
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 244 ARCPQTRPSGVETILSTLSSARPE 315
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>05_05_0215 - 23352363-23352666,23353183-23353495,23353590-23353713
Length = 246
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -3
Query: 544 CRPGTLXSELADFCPKPNLRFPFQ---WCSDPR 455
C PG++ +FCP PN P WC+ PR
Sbjct: 88 CLPGSITVTATNFCP-PNYGLPSDDGGWCNPPR 119
>01_06_0347 + 28592552-28593502
Length = 316
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 431 GRCGQQLCPWVTTPLERKS*IWFWTEIRKLAXQCT 535
G CG++ C W P E++ W + + ++ CT
Sbjct: 240 GSCGKKACMWPQIPNEKREINWLFLFLGQMLGCCT 274
>03_05_0246 + 22333172-22333417
Length = 81
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 434 FLTSNKLFWMKQLSVCASADLINNSXFKIDEDSTGYVLASSGLAEESVERIVSTPDGLVC 255
FL S LF++ L + L N S FKI + +T +V E++ ++ +C
Sbjct: 13 FLFSVSLFYIPDLMIDWIDPLTNKSTFKIKDTTTSFVEEKKNELEKAKSKLNVISSNKIC 72
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 187 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 315
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 271 PMVLSVGIWPSGWMPCSR 218
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,325,697
Number of Sequences: 37544
Number of extensions: 584879
Number of successful extensions: 1695
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1660
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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