Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_A18
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 260 1e-69
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 260 1e-69
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 260 1e-69
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 258 5e-69
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 238 4e-63
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 238 4e-63
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 237 1e-62
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 237 1e-62
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 236 1e-62
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 235 4e-62
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 234 7e-62
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 234 7e-62
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 217 7e-57
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 217 1e-56
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 196 2e-50
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 173 1e-43
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 106 2e-23
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 106 2e-23
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 104 7e-23
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 103 2e-22
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 102 3e-22
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 95 8e-20
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 95 8e-20
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 60 3e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 60 3e-09
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.63
AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical... 28 7.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 260 bits (636), Expect = 1e-69
Identities = 135/218 (61%), Positives = 151/218 (69%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
HVPRAV VDLE TV+DE+RTGTYR LFHPEQLITGKEDAANNYARG H+ G
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG--HYTIGKEIIDLT 118
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGFL+FHSFGG G LLMERLSVDYGKK+KLEF
Sbjct: 119 LDRIRRLADNCTGLQGFLVFHSFGGGTGS-GFTSLLMERLSVDYGKKAKLEFSIYPAPQV 177
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DC+F + IYDI
Sbjct: 178 STAVVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 212
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 260 bits (636), Expect = 1e-69
Identities = 135/218 (61%), Positives = 151/218 (69%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
HVPRAV VDLE TV+DE+RTGTYR LFHPEQLITGKEDAANNYARG H+ G
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG--HYTIGKEIIDLT 118
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGFL+FHSFGG G LLMERLSVDYGKK+KLEF
Sbjct: 119 LDRIRRLADNCTGLQGFLVFHSFGGGTGS-GFTSLLMERLSVDYGKKAKLEFSIYPAPQV 177
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DC+F + IYDI
Sbjct: 178 STAVVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 212
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 260 bits (636), Expect = 1e-69
Identities = 135/218 (61%), Positives = 151/218 (69%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
HVPRAV VDLE TV+DE+RTGTYR LFHPEQLITGKEDAANNYARG H+ G
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG--HYTIGKEIIDLT 118
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGFL+FHSFGG G LLMERLSVDYGKK+KLEF
Sbjct: 119 LDRIRRLADNCTGLQGFLVFHSFGGGTGS-GFTSLLMERLSVDYGKKAKLEFSIYPAPQV 177
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DC+F + IYDI
Sbjct: 178 STAVVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 212
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 258 bits (631), Expect = 5e-69
Identities = 134/217 (61%), Positives = 150/217 (69%), Gaps = 1/217 (0%)
Frame = +3
Query: 147 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 326
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 327 VPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFGQ 506
VPRAV VDLE TV+DE+RTGTYR LFHPEQLITGKEDAANNYARG H+ G
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG--HYTIGKEIIDLTL 118
Query: 507 KSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALXF 683
L + GLQGFL+FHSFGG G LLMERLSVDYGKK+KLEF
Sbjct: 119 DRIRRLADNCTGLQGFLVFHSFGGGTGS-GFTSLLMERLSVDYGKKAKLEFSIYPAPQVS 177
Query: 684 PLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DC+F + IYDI
Sbjct: 178 TAVVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 211
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 238 bits (582), Expect = 4e-63
Identities = 129/218 (59%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
+VPR++FVDLE TVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTV 116
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGF +FHSFGG G LLMERLSVDYGKKSKLEF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGS-GFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DCAF + IYDI
Sbjct: 176 STAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 238 bits (582), Expect = 4e-63
Identities = 129/218 (59%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
+VPR++FVDLE TVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTV 116
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGF +FHSFGG G LLMERLSVDYGKKSKLEF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGS-GFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DCAF + IYDI
Sbjct: 176 STAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 237 bits (579), Expect = 1e-62
Identities = 128/218 (58%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
+VPR++FVDLE TVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTV 116
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGF +FHSFGG G LLMERLSVDYGKKSKLEF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGS-GFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DCAF + IYDI
Sbjct: 176 STAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 237 bits (579), Expect = 1e-62
Identities = 128/218 (58%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
+VPR++FVDLE TVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTV 116
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGF +FHSFGG G LLMERLSVDYGKKSKLEF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGS-GFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DCAF + IYDI
Sbjct: 176 CTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 236 bits (578), Expect = 1e-62
Identities = 127/219 (57%), Positives = 144/219 (65%), Gaps = 1/219 (0%)
Frame = +3
Query: 141 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 320
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 321 KHVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGF 500
KHVPRA+ VDLE T +DE+RTGTY+ LFHPEQL+TGKEDAANNYARG H+ G
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG--HYTIGKEIIDV 122
Query: 501 GQKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRAL 677
L + GLQGFL+FHSFGG G LLMERLSVDYGKKSKLEF
Sbjct: 123 VMDRVRRLVENCRGLQGFLVFHSFGGGTGS-GFTALLMERLSVDYGKKSKLEFCIYPAPQ 181
Query: 678 XFPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DC+F + IYDI
Sbjct: 182 VSTSMVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 217
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 235 bits (574), Expect = 4e-62
Identities = 115/172 (66%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
HVPRA+FVDLE TV+DEVRTGTY +LFHPEQLI+GKEDAANNYARG H+ G
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARG--HYTIGKELIDVV 118
Query: 504 QKSASSLXS-VPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
L LQGFLIFHSFGG G L+MERLS+DYGKK+KLEF
Sbjct: 119 MDRVRRLTERCQSLQGFLIFHSFGGGTGS-GFTSLVMERLSIDYGKKAKLEF 169
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 234 bits (572), Expect = 7e-62
Identities = 127/218 (58%), Positives = 144/218 (66%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
+VPR++FVDLE TVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTT 116
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGF +FHSFGG G LLMERLSVDYGKKSKLEF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGS-GFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DCAF + IYDI
Sbjct: 176 STAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 234 bits (572), Expect = 7e-62
Identities = 127/218 (58%), Positives = 144/218 (66%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
+VPR++FVDLE TVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARG H+ G
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARG--HYTVGKELIDTT 116
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGF +FHSFGG G LLMERLSVDYGKKSKLEF
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGS-GFTSLLMERLSVDYGKKSKLEFSIYPAPQV 175
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DCAF + IYDI
Sbjct: 176 STAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 217 bits (531), Expect = 7e-57
Identities = 121/217 (55%), Positives = 134/217 (61%), Gaps = 1/217 (0%)
Frame = +3
Query: 147 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 326
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 327 VPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFGQ 506
VPR +FVDLE TVVDEVRTGTYR LFHPEQL++GKEDAAN YARG + G
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARG--RYTIGREMIDVVM 125
Query: 507 KSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALXF 683
L + GLQGF+IFHSFGG G L LLMERLS +YGKK KLEF
Sbjct: 126 DRVKRLAENCNGLQGFVIFHSFGGGTGS-GFLSLLMERLSTEYGKKPKLEFAIYPAPQVS 184
Query: 684 PLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DC F + IYDI
Sbjct: 185 TSMVEPYNSIL--MTHTTLEHSDCTFMVDN-EAIYDI 218
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 217 bits (529), Expect = 1e-56
Identities = 119/218 (54%), Positives = 136/218 (62%), Gaps = 1/218 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG 503
HVPR++FVDLE TVVDE+RTG Y++LFHPEQ++TGKEDAANNYARG H+ G
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARG--HYTVGKEIIDTT 115
Query: 504 QKSASSL-XSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALX 680
L + GLQGF +FHSFGG G +LMERLS +YGKKSKLEF
Sbjct: 116 LDRIRRLANNCEGLQGFFVFHSFGGGTGS-GFTSMLMERLSAEYGKKSKLEFSIYPAPQI 174
Query: 681 FPLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DC+F + IYDI
Sbjct: 175 STSVVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 209
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 196 bits (478), Expect = 2e-50
Identities = 106/217 (48%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Frame = +3
Query: 147 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 326
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 327 VPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFG- 503
VPRA++VDLE TV+DE+R G Y LFHP+Q+I GKEDAANNYARG H+ G
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG--HYTIGKELIDVVL 122
Query: 504 QKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALXF 683
+ + GLQGFL+FHSFGG G LLMERLSV++GKKSKLEF
Sbjct: 123 DRIRKQTENCEGLQGFLVFHSFGGGTGS-GFSSLLMERLSVEFGKKSKLEFSVYPAPQVS 181
Query: 684 PLAVRRXLQIYPHXPHKPLSXPDCAFHGSTMKPIYDI 794
V I H L DC+F + IYD+
Sbjct: 182 TSVVEPYNSIL--TTHTTLELSDCSFMVDN-EAIYDL 215
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 173 bits (422), Expect = 1e-43
Identities = 101/196 (51%), Positives = 114/196 (58%), Gaps = 1/196 (0%)
Frame = +3
Query: 210 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEXTVVDEVRTGT 389
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLE TVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 390 YRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFGQKSASSL-XSVPGLQGFLIFHS 566
YR LFHPEQL++GKEDAAN YARG + G L + GLQGF+IFHS
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARG--RYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHS 118
Query: 567 FGGRYRLWGSLPLLMERLSVDYGKKSKLEFRHLXRALXFPLAVRRXLQIYPHXPHKPLSX 746
FGG G L LLMERLS +YGKK KLEF V I H L
Sbjct: 119 FGGGTGS-GFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSIL--MTHTTLEH 175
Query: 747 PDCAFHGSTMKPIYDI 794
DC F + IYDI
Sbjct: 176 SDCTFMVDN-EAIYDI 190
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 106 bits (254), Expect = 2e-23
Identities = 57/145 (39%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRF-GF 500
+VPRAV VDLE +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 501 GQKSASSLXSVPGLQGFLIFHSFGG 575
S LQGF + HS GG
Sbjct: 117 LDVVRKEAESTDCLQGFQLTHSLGG 141
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 106 bits (254), Expect = 2e-23
Identities = 57/145 (39%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRF-GF 500
+VPRAV VDLE +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 501 GQKSASSLXSVPGLQGFLIFHSFGG 575
S LQGF + HS GG
Sbjct: 117 LDVVRKEAESTDCLQGFQLTHSLGG 141
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 104 bits (250), Expect = 7e-23
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG----NRR 491
+VPRAV VDLE +D VR+G + QLF P+ + G+ A NN+A+G H+ +G +
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 492 FGFGQKSASSLXSVPGLQGFLIFHSFGG 575
+K A LQGF + HS GG
Sbjct: 117 LDVVRKEAEGCDC---LQGFQLTHSLGG 141
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 103 bits (246), Expect = 2e-22
Identities = 56/145 (38%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRF-GF 500
+VPRAV VDLE +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 501 GQKSASSLXSVPGLQGFLIFHSFGG 575
LQGF + HS GG
Sbjct: 117 LDVIRKEAEGCDCLQGFQLTHSLGG 141
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 102 bits (245), Expect = 3e-22
Identities = 56/145 (38%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRF-GF 500
+VPRAV VDLE +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 501 GQKSASSLXSVPGLQGFLIFHSFGG 575
LQGF + HS GG
Sbjct: 117 LDVIRKEAEGCDCLQGFQLTHSLGG 141
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 100 bits (240), Expect = 1e-21
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG----NRR 491
+VPRA VDLE +D VR G + QLF P+ + G+ A NN+A+G H+ +G +
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEGAELVDNV 116
Query: 492 FGFGQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKSKLEF 656
+K A S LQGF + HS GG G LL+ ++ +Y + + F
Sbjct: 117 LDVVRKEAESCDC---LQGFQMTHSLGGGTGS-GMGTLLISKIREEYPDRIMMTF 167
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 94.7 bits (225), Expect = 8e-20
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG--NRRFG 497
+VPRA+ VDL+ ++ VR+ Y +LF PE ++G+ A NN++RG ++
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 498 FGQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKS 644
++ A + S L+GF + HS GG G LL+ +L +Y K+
Sbjct: 119 VIRREAEAADS---LEGFQLIHSLGGGTGS-GLGSLLISKLREEYSDKT 163
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 94.7 bits (225), Expect = 8e-20
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 324 HVPRAVFVDLEXTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG--NRRFG 497
+VPRA+ VDL+ ++ VR+ Y +LF PE ++G+ A NN++RG ++
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 498 FGQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKKS 644
++ A + S L+GF + HS GG G LL+ +L +Y K+
Sbjct: 119 VIRREAEAADS---LEGFQLIHSLGGGTGS-GLGSLLISKLREEYSDKT 163
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 59.7 bits (138), Expect = 3e-09
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Frame = +3
Query: 156 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 335
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 336 AVFVDLEXTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGSLHHWKGNRRFGFGQ 506
AV VDLE V++ +++ + LF+ + + A NN+A G + +
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGYCQGQEVQEK--IMD 122
Query: 507 KSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKK 641
+ L G L HS G G+ LL+ERL + KK
Sbjct: 123 IIIREAENTNNLDGILFTHSVSGGTGS-GTGSLLLERLREAFPKK 166
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 59.7 bits (138), Expect = 3e-09
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Frame = +3
Query: 156 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 335
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 336 AVFVDLEXTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGSLHHWKGNRRFGFGQ 506
AV VDLE V++ +++ + LF+ + + A NN+A G + +
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGYCQGQEVQEK--IMD 122
Query: 507 KSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVDYGKK 641
+ L G L HS G G+ LL+ERL + KK
Sbjct: 123 IIIREAENTNNLDGILFTHSVSGGTGS-GTGSLLLERLREAFPKK 166
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 172 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 327
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical
protein C17H12.5 protein.
Length = 443
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 628 STERRSINKGSEPQSRYLPPKEWKIRNPCRPGT 530
ST+ + K +S +PPK+WK + + GT
Sbjct: 2 STKEKKTKKPHNVKSSVVPPKKWKTKKKDKKGT 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,474,110
Number of Sequences: 27780
Number of extensions: 450884
Number of successful extensions: 1139
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -