Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A18
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    29   0.043
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    29   0.043
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   4.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.9  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   8.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 29.5 bits (63), Expect = 0.043
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 471 HWKGNRRFGFGQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVD 629
           HW       +  +S      +  L+G +I HS+GG +    ++ L+ +RLS D
Sbjct: 633 HWNDLAMEFYYNRSIPDHKRIVKLRGSIIDHSYGGGFGFGSAVLLISDRLSRD 685


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 29.5 bits (63), Expect = 0.043
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 471 HWKGNRRFGFGQKSASSLXSVPGLQGFLIFHSFGGRYRLWGSLPLLMERLSVD 629
           HW       +  +S      +  L+G +I HS+GG +    ++ L+ +RLS D
Sbjct: 671 HWNDLAMEFYYNRSIPDHKRIVKLRGSIIDHSYGGGFGFGSAVLLISDRLSRD 723


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 207 PSRHYRSGLR 178
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 439 RPTTMPVGHYTIGKEIVDLVLDRNP 513
           R  T PV   T+   +V+L L  NP
Sbjct: 901 RLVTFPVWQVTLNARLVELSLGSNP 925


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 270 RWSCLWASGHQAGCRAPGSKAPSRHYR 190
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 270 RWSCLWASGHQAGCRAPGSKAPSRHYR 190
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 270 RWSCLWASGHQAGCRAPGSKAPSRHYR 190
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 241 MARCPQTRPSGVETILSTLSSARPE 315
           +A+ P      + T+ ST+SSA+PE
Sbjct: 7   VAQLPHHLSPNMPTMDSTVSSAKPE 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,131
Number of Sequences: 438
Number of extensions: 6122
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)