SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A17
         (1013 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX640870-1|CAE45928.1|  510|Homo sapiens hypothetical protein pr...    28   0.47 
AF031588-1|AAC03767.1|  503|Homo sapiens WASP interacting protei...    28   0.47 
AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.              28   0.47 
X86019-1|CAA60014.1|  494|Homo sapiens SH3-domain interacting pr...    28   0.47 
BC110288-1|AAI10289.1|  403|Homo sapiens WIPF1 protein protein.        28   0.48 
AF106062-1|AAD45972.1|  312|Homo sapiens Wiskott-Aldrich syndrom...    28   0.49 
X66188-1|CAA46956.1|  421|Homo sapiens proacrosin protein.             31   5.0  
X54017-1|CAA37964.1|  421|Homo sapiens preproacrosin protein.          31   5.0  
M77381-1|AAA51575.1|  184|Homo sapiens acrosin protein.                31   5.0  
L20969-1|AAC00042.1|  809|Homo sapiens cyclic AMP phosphodiester...    31   5.0  
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.     25   5.9  
AK091683-1|BAC03720.1|  749|Homo sapiens protein ( Homo sapiens ...    31   6.7  
AK056450-1|BAB71186.1|  568|Homo sapiens protein ( Homo sapiens ...    31   6.7  
AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein.     31   6.7  

>BX640870-1|CAE45928.1|  510|Homo sapiens hypothetical protein
           protein.
          Length = 510

 Score = 28.3 bits (60), Expect(2) = 0.47
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 917 FFNXPPXHXXPXXXXXXXPPPPPP 988
           F N PP    P       PPPPPP
Sbjct: 246 FSNRPPLPPTPSRALDDKPPPPPP 269



 Score = 25.4 bits (53), Expect(2) = 0.47
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 974  PPPPPXSXXPPXP 1012
            PPPPP +  PP P
Sbjct: 283  PPPPPQNNKPPVP 295


>AF031588-1|AAC03767.1|  503|Homo sapiens WASP interacting protein
           protein.
          Length = 503

 Score = 28.3 bits (60), Expect(2) = 0.47
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 917 FFNXPPXHXXPXXXXXXXPPPPPP 988
           F N PP    P       PPPPPP
Sbjct: 246 FSNRPPLPPTPSRALDDKPPPPPP 269



 Score = 25.4 bits (53), Expect(2) = 0.47
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 974  PPPPPXSXXPPXP 1012
            PPPPP +  PP P
Sbjct: 283  PPPPPQNNKPPVP 295


>AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.
          Length = 503

 Score = 28.3 bits (60), Expect(2) = 0.47
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 917 FFNXPPXHXXPXXXXXXXPPPPPP 988
           F N PP    P       PPPPPP
Sbjct: 246 FSNRPPLPPTPSRALDDKPPPPPP 269



 Score = 25.4 bits (53), Expect(2) = 0.47
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 974  PPPPPXSXXPPXP 1012
            PPPPP +  PP P
Sbjct: 283  PPPPPQNNKPPVP 295


>X86019-1|CAA60014.1|  494|Homo sapiens SH3-domain interacting
           protein protein.
          Length = 494

 Score = 28.3 bits (60), Expect(2) = 0.47
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 917 FFNXPPXHXXPXXXXXXXPPPPPP 988
           F N PP    P       PPPPPP
Sbjct: 246 FSNRPPLPPTPSRALDDKPPPPPP 269



 Score = 25.4 bits (53), Expect(2) = 0.47
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 974  PPPPPXSXXPPXP 1012
            PPPPP +  PP P
Sbjct: 283  PPPPPQNNKPPVP 295


>BC110288-1|AAI10289.1|  403|Homo sapiens WIPF1 protein protein.
          Length = 403

 Score = 28.3 bits (60), Expect(2) = 0.48
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 917 FFNXPPXHXXPXXXXXXXPPPPPP 988
           F N PP    P       PPPPPP
Sbjct: 246 FSNRPPLPPTPSRALDDKPPPPPP 269



 Score = 25.4 bits (53), Expect(2) = 0.48
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 974  PPPPPXSXXPPXP 1012
            PPPPP +  PP P
Sbjct: 283  PPPPPQNNKPPVP 295


>AF106062-1|AAD45972.1|  312|Homo sapiens Wiskott-Aldrich syndrome
           protein interacting protein protein.
          Length = 312

 Score = 28.3 bits (60), Expect(2) = 0.49
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 917 FFNXPPXHXXPXXXXXXXPPPPPP 988
           F N PP    P       PPPPPP
Sbjct: 55  FSNRPPLPPTPSRALDDKPPPPPP 78



 Score = 25.4 bits (53), Expect(2) = 0.49
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 974  PPPPPXSXXPPXP 1012
            PPPPP +  PP P
Sbjct: 92   PPPPPQNNKPPVP 104


>X66188-1|CAA46956.1|  421|Homo sapiens proacrosin protein.
          Length = 421

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 15/54 (27%), Positives = 17/54 (31%)
 Frame = +2

Query: 845  PXPXXPKXQTREXFXFXXXTXXXFFFNXPPXHXXPXXXXXXXPPPPPPXSXXPP 1006
            P P       R  F         ++F  PP    P       PPPP P    PP
Sbjct: 303  PPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPPPPPSPPPPPPP 356


>X54017-1|CAA37964.1|  421|Homo sapiens preproacrosin protein.
          Length = 421

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 15/54 (27%), Positives = 17/54 (31%)
 Frame = +2

Query: 845  PXPXXPKXQTREXFXFXXXTXXXFFFNXPPXHXXPXXXXXXXPPPPPPXSXXPP 1006
            P P       R  F         ++F  PP    P       PPPP P    PP
Sbjct: 303  PPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPPPPPSPPPPPPP 356


>M77381-1|AAA51575.1|  184|Homo sapiens acrosin protein.
          Length = 184

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 15/54 (27%), Positives = 17/54 (31%)
 Frame = +2

Query: 845  PXPXXPKXQTREXFXFXXXTXXXFFFNXPPXHXXPXXXXXXXPPPPPPXSXXPP 1006
            P P       R  F         ++F  PP    P       PPPP P    PP
Sbjct: 66   PPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPPPPPSPPPPPPP 119


>L20969-1|AAC00042.1|  809|Homo sapiens cyclic AMP phosphodiesterase
            protein.
          Length = 809

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +2

Query: 929  PPXHXXPXXXXXXXPPPPPPXSXXPPXP 1012
            PP    P       PPPPPP    PP P
Sbjct: 61   PPPSPQPQPQCPLQPPPPPPLPPPPPPP 88


>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
          Length = 1709

 Score = 25.0 bits (52), Expect(2) = 5.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 971  PPPPPPXSXXPP 1006
            PPPPPP    PP
Sbjct: 607  PPPPPPPPPPPP 618



 Score = 24.6 bits (51), Expect(2) = 5.9
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +2

Query: 929 PPXHXXPXXXXXXXPPPPPP 988
           PP    P       PPPPPP
Sbjct: 596 PPPAPTPPQQPPPPPPPPPP 615


>AK091683-1|BAC03720.1|  749|Homo sapiens protein ( Homo sapiens cDNA
            FLJ34364 fis, clone FEBRA2015175, weakly similar to Mus
            musculus (clone E5.53) Huntington disease (hdh) gene. ).
          Length = 749

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +2

Query: 929  PPXHXXPXXXXXXXPPPPPPXSXXPPXP 1012
            PP    P       PPPPPP    PP P
Sbjct: 657  PPPPPPPPPPLALPPPPPPPPPLPPPLP 684


>AK056450-1|BAB71186.1|  568|Homo sapiens protein ( Homo sapiens cDNA
            FLJ31888 fis, clone NT2RP7003055. ).
          Length = 568

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +2

Query: 929  PPXHXXPXXXXXXXPPPPPPXSXXPPXP 1012
            PP    P       PPPPPP    PP P
Sbjct: 339  PPPPPPPPPPLALPPPPPPPPPLPPPLP 366


>AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein.
          Length = 1652

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +2

Query: 929  PPXHXXPXXXXXXXPPPPPPXSXXPPXP 1012
            PP    P       PPPPPP    PP P
Sbjct: 1423 PPPPPPPPPPLALPPPPPPPPPLPPPLP 1450


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,529,845
Number of Sequences: 237096
Number of extensions: 2755862
Number of successful extensions: 17853
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13863
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13599698196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -