Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_A17
(1013 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 33 0.43
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.99
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.99
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.99
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.99
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 30 3.0
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 30 3.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 7.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.0
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 9.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 9.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 9.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 10.0
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 32.7 bits (71), Expect = 0.43
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 902 TXXXFFFNXPPXHXXPXXXXXXXPPPPPP 988
T FFF+ PP P PPPPPP
Sbjct: 144 TDLGFFFDQPPPTPIPTPVPILEPPPPPP 172
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPPXSXXPPXP 1012
PP P PPPPPP PP P
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPPXSXXPPXP 1012
PP P PPPPPP PP P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPPXSXXPPXP 1012
PP P PPPPPP PP P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPPXSXXPPXP 1012
PP P PPPPPP PP P
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPP 356
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 61 CASACTSFFKYYNFFCLCIFDANGFGCDQVLCVAVG 168
CA T YN++C C +G C++ C +G
Sbjct: 163 CAEGSTCVNSVYNYYCDCPIGKSGRYCERTECALMG 198
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 61 CASACTSFFKYYNFFCLCIFDANGFGCDQVLCVAVG 168
CA T YN++C C +G C++ C +G
Sbjct: 163 CAEGSTCVNSVYNYYCDCPIGKSGRYCERTECALMG 198
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 61 CASACTSFFKYYNFFCLCIFDANGFGCDQVLCVAVG 168
CA T YN++C C +G C++ C +G
Sbjct: 163 CAEGSTCVNSVYNYYCDCPIGKSGRYCERTECALMG 198
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPPXSXXPP 1006
PP P PPPPPP PP
Sbjct: 498 PPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPPXSXXPP 1006
PP P PPPPPP PP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPPXSXXPP 1006
PP P PPPPPP PP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPPXSXXPP 1006
PP P PPPPPP PP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPP 314
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 9.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 971 PPPPPPXSXXPPXP 1012
PPPPPP + PP P
Sbjct: 757 PPPPPPLAAAPPQP 770
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPPXSXXPPXP 1012
PP P PP PPP + PP P
Sbjct: 1586 PPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.6 bits (51), Expect(2) = 9.8
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPP 988
PP P PPPPPP
Sbjct: 636 PPPMGLPAVGAGAPPPPPPP 655
Score = 21.8 bits (44), Expect(2) = 9.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 971 PPPPPPXSXXPP 1006
PPPPPP P
Sbjct: 652 PPPPPPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.6 bits (51), Expect(2) = 10.0
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 929 PPXHXXPXXXXXXXPPPPPP 988
PP P PPPPPP
Sbjct: 462 PPPMGLPAVGAGAPPPPPPP 481
Score = 21.8 bits (44), Expect(2) = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 971 PPPPPPXSXXPP 1006
PPPPPP P
Sbjct: 478 PPPPPPSGAGGP 489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,937,044
Number of Sequences: 27780
Number of extensions: 366919
Number of successful extensions: 2447
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2027
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2667870690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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