BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_A14
(831 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 2.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.6
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 4.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 4.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 4.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 4.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 4.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 4.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 4.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 4.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 4.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 4.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 4.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 4.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 4.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 4.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 4.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 4.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 8.0
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 8.0
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 94 FGYLRTSSRIGYXNHHSN 41
F YL S RI Y N +SN
Sbjct: 444 FAYLSRSERINYYNVNSN 461
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 586 PPPPKXXPPXXGGXPPPPP 642
PP P PP GG P PP
Sbjct: 39 PPNPSQGPP-PGGPPGAPP 56
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 123 GPLTPFPPRFIPPDMYRLRPPP 144
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 123 GPLTPFPPRFIPPDMYRLRPPP 144
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 123 GPLTPFPPRFIPPDMYRLRPPP 144
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 123 GPLTPFPPRFIPPDMYRLRPPP 144
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 123 GPLTPFPPRFIPPDMYRLRPPP 144
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 123 GPLTPFPPRFIPPDMYRLRPPP 144
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 123 GPLTPFPPRFIPPDMYRLRPPP 144
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 372 GPLTPFPPRFIPPDMYRLRPPP 393
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 372 GPLTPFPPRFIPPDMYRLRPPP 393
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 372 GPLTPFPPRFIPPDMYRLRPPP 393
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 372 GPLTPFPPRFIPPDMYRLRPPP 393
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 372 GPLTPFPPRFIPPDMYRLRPPP 393
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 372 GPLTPFPPRFIPPDMYRLRPPP 393
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 371 GPLTPFPPRFIPPDMYRLRPPP 392
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 356 GPLTPFPPRFIPPDMYRLRPPP 377
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 574 GXFXPPPPKXXPPXXGGXPPPP 639
G P PP+ PP PPP
Sbjct: 372 GPLTPFPPRFIPPDMYRLRPPP 393
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 562 PFXGGXFXPPPPKXXPPXXGGXPPPP 639
PF F PPP P G P P
Sbjct: 1157 PFTPFNFWNPPPFMPSPFMAGAPNVP 1182
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 160 SFDECMHIGEADSQQDNQQLVHFGY 86
S D + + D+Q+DN Q++ + Y
Sbjct: 298 SKDSLVFVDNHDTQRDNPQILTYKY 322
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,737
Number of Sequences: 438
Number of extensions: 5509
Number of successful extensions: 22
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -