Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_A11
(924 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.019
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.075
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 0.12
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.21
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.23
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.53
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.70
SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|ch... 29 0.70
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.6
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 23 3.6
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.7
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 4.9
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.5
SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual 26 6.5
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 8.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 567 SAVLXXPXPPXPPPPPPXPXXSGPXAPPLX*GLXGXPPXAXNP 695
+ ++ P P P PPP P GP PP G+ G P P
Sbjct: 738 AVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 591 PPXPPPPPPXPXXSG 635
PP PPPPPP G
Sbjct: 775 PPPPPPPPPAVSAGG 789
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.075
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -3
Query: 736 GXXRGXGXXXXSXKGFXAX-GGXPXNPXLRGGAXGPEXXGXGGGGGGXGGXG 584
G G G GF GG P GG G G GG GGG GG G
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -3
Query: 724 GXGXXXXSXKGFXAX-GGXPXNPXLRGGAXGPEXXGXGGGGGGXGGXG 584
G G GF GG P GG G G GG GGG GG G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 736 GXXRGXGXXXXSXKGFXAXGGXPXNPXLRGGAXGPEXXGXGGGGGGXGG 590
G G G G GG P G G G GGG GG GG
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGG 256
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect(2) = 0.12
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 591 PPXPPPPPPXPXXSG 635
PP PPPPPP +G
Sbjct: 945 PPPPPPPPPLVSAAG 959
Score = 25.8 bits (54), Expect = 8.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 594 PXPPPPPPXP 623
P PPPPPP P
Sbjct: 905 PTPPPPPPLP 914
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 564 ISAVLXXPXPPXPPPPPPXPXXSGPXAPP 650
++ V+ PP PPPPP G P
Sbjct: 937 VAGVMPAFPPPPPPPPPLVSAAGGKFVSP 965
Score = 23.4 bits (48), Expect(2) = 0.12
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 564 ISAVLXXPXPPXPPPPP 614
+ ++ P PP PPP P
Sbjct: 898 LPTIITHPTPPPPPPLP 914
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect(2) = 0.21
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 591 PPXPPPPPP 617
PP PPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 23.4 bits (48), Expect(2) = 0.21
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 594 PXPPPPPPXPXXSGPXAPP 650
P P PPPP P P PP
Sbjct: 234 PLPAPPPPPP----PTLPP 248
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 591 PPXPPPPPPXPXXSGPXAPP 650
P PPPPPP P P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPP 25
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 570 AVLXXPXPPXPPPPPPXPXXSGPXAPP 650
A L PP PPPPP S P PP
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 591 PPXPPPPPPXPXXSGPXAPP 650
PP PPPP P P PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.53
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 603 PPPPPXPXXSGPXAPPLX*GLXGXPP 680
PPPPP P APP+ G PP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +3
Query: 585 PXPPXPP--PPPPXPXXSGPXAP 647
P P PP PPPP P S P P
Sbjct: 1722 PMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
Frame = +3
Query: 585 PXPPXPP---PPPP--XPXXSGPXAPP 650
P PP PP PPPP P +GP + P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 591 PPXPPPPPPXPXXSGPXAPPLX*GLXGXPP 680
P P PP P S P APPL G+ PP
Sbjct: 440 PMGAPAAPPLPP-SAPIAPPLPAGMPAAPP 468
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 585 PXPPXPPPPPPXPXXSGPXAPPLX*GLXGXPP 680
P PP P PP P P APPL PP
Sbjct: 448 PLPPSAPIAPPLPAGM-PAAPPLPPAAPAPPP 478
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Frame = +3
Query: 591 PPXPPPPPPXPXXSGPXAPPLX*GLXGXPP-----XAXNPLXEXXXXPXPLKXP 737
P PP PP P APPL PP A PL P P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 600 PPPPPPXPXXSGPXAPPL 653
P PPP P S P PPL
Sbjct: 389 PAPPPAIPGRSAPALPPL 406
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +3
Query: 576 LXXPXPPXPPPPPPXPXXSGPXAPPLX*GLXGXPPXAXNPLXEXXXXPXPLKXP 737
L P PP PPP S P +PP P + NP P PL P
Sbjct: 248 LSAPAPPPIPPPSNGTVSSPPNSPP-----RPIAPVSMNPAINSTSKP-PLPPP 295
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +3
Query: 585 PXPPXPPPPPPXPXXSGPXAPP-LX*GLXGXPP 680
P P P PP P P APP L G PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 585 PXPPXPPPPPPXPXXSGPXAP 647
P PP P PPP P + P AP
Sbjct: 468 PLPPAAPAPPPAPAPA-PAAP 487
>SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|chr
2|||Manual
Length = 157
Score = 29.5 bits (63), Expect = 0.70
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +1
Query: 88 FTMFLLVSLMALAASKSLFEKSCPENAHTTLNPXRADPGADPELKHTSCVTAFIATCHCD 267
F +FLL L A S F+ + PE+ P + P L H F+
Sbjct: 32 FLLFLLPVLFVFARSMIEFDDTYPESVSKRARPSQKPPLRSTHLPHLLIFALFVGKHIAC 91
Query: 268 SGYLFNSEGKCXPVAE 315
+L S C P +E
Sbjct: 92 FHHLLLSSLPCLPRSE 107
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 591 PPXPPPPP-PXPXXSGPXAPPLX*G 662
P PPPPP P P + P APPL G
Sbjct: 3 PAPPPPPPAPAPAAAAP-APPLMTG 26
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +3
Query: 585 PXPPXPPPP--PPXPXXSGPXAPPLX*GLXGXPPXAXNP 695
P P PPP P P S P AP L + PP P
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 652 RGGAXGPEXXGXGGGGGGXGGXG 584
RGG G G GG GG GG G
Sbjct: 36 RGGGRGGARGGRGGRGGARGGRG 58
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -3
Query: 736 GXXRGXGXXXXSXKGFXAXGGXPXNPXLRGGAXGPEXXGXGGGGGGXGG 590
G G G +G GG RGGA G GG GG GG
Sbjct: 23 GGRGGFGGGRGGARG-GGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 600 PPPPPPXP 623
PPPPPP P
Sbjct: 1095 PPPPPPPP 1102
Score = 21.8 bits (44), Expect(2) = 3.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 585 PXPPXPPPPPP 617
P PPPPPP
Sbjct: 1091 PSAVPPPPPPP 1101
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 594 PXPPPPPPXPXXSGPXAPPL 653
P PPPPPP P + PL
Sbjct: 370 PPPPPPPPELLNHSPKSRPL 389
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 591 PPXPPPPPPXPXXSGPXAPPLX*GLXGXPP 680
PP PPP P + APP+ PP
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPP 235
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 591 PPXPPPPPP 617
PP PPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 312
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 339 IASASYSTFGNGXAFSLRVEEVSRITVAGCDESRHATGVF 220
I S S S FG+G AF L E V G + + G+F
Sbjct: 92 INSESTSLFGDGLAFFLAAERAKPGPVFGFTDKFNGYGIF 131
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 594 PXPPPPPPXPXXSGPXAP 647
P PPPP P P + P P
Sbjct: 356 PPPPPPMPAPIYNVPNVP 373
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +3
Query: 594 PXPPPPPPXPXXSGPXAPPLX*GLXGXPPXAXNPLXEXXXXPXPL 728
P PPPP P P A P PP + P P+
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPV 1926
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,007,463
Number of Sequences: 5004
Number of extensions: 55684
Number of successful extensions: 319
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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