Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A11
         (924 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    32   0.006
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    27   0.32 
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    27   0.32 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   2.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.8  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   6.8  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 32.3 bits (70), Expect = 0.006
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 591 PPXPPPPPPXPXXSGPXAPPL 653
           PP P PPPP P  SGP +  L
Sbjct: 338 PPKPAPPPPPPSSSGPDSAKL 358


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 26.6 bits (56), Expect = 0.32
 Identities = 14/55 (25%), Positives = 20/55 (36%)
 Frame = +1

Query: 154 CPENAHTTLNPXRADPGADPELKHTSCVTAFIATCHCDSGYLFNSEGKCXPVAEC 318
           CP N   +    R        +    C+      C C  GYL N +  C P ++C
Sbjct: 37  CPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 26.6 bits (56), Expect = 0.32
 Identities = 14/55 (25%), Positives = 20/55 (36%)
 Frame = +1

Query: 154 CPENAHTTLNPXRADPGADPELKHTSCVTAFIATCHCDSGYLFNSEGKCXPVAEC 318
           CP N   +    R        +    C+      C C  GYL N +  C P ++C
Sbjct: 37  CPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 603  PPPPPXPXXSG 635
            PPPPP P  SG
Sbjct: 1355 PPPPPPPPSSG 1365



 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 591  PPXPPPPP 614
            PP PPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 594  PXPPPPPP 617
            P PPPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 600  PPPPPPXP 623
            PPPPPP P
Sbjct: 1355 PPPPPPPP 1362


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 594  PXPPPPPP 617
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 265 DSGYLFNSEGK 297
           DSGY+ N++GK
Sbjct: 339 DSGYILNNDGK 349


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 265 DSGYLFNSEGK 297
           DSGY+ N++GK
Sbjct: 339 DSGYILNNDGK 349


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 317 VEYDAEAISTDFDL 358
           V Y+ E +STD+D+
Sbjct: 417 VNYNPETVSTDYDM 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,937
Number of Sequences: 438
Number of extensions: 6477
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)