Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A10
         (1178 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468...    29   7.1  
06_02_0175 - 12624608-12625297                                         29   9.4  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    26   9.6  

>08_01_0539 +
           4679392-4681282,4682060-4682104,4682403-4683560,
           4683834-4684204,4684290-4684835,4684927-4685027,
           4685117-4685933,4686025-4686213,4686313-4686384,
           4686477-4686587,4686647-4686652,4686694-4686794,
           4687714-4687813,4687891-4687986,4688157-4688273,
           4688367-4688492,4688566-4688619,4688745-4688992,
           4689087-4689195,4689284-4689583,4689799-4689963
          Length = 2240

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 14/48 (29%), Positives = 16/48 (33%)
 Frame = +1

Query: 637 PPXPPPPXXXXPGXRGXXPPFRXXXYXGLPXXXIXTPFXXXLGXQPPH 780
           PP PPPP    P      PP       G P   +       +   PPH
Sbjct: 435 PPPPPPPPPLPPNMPPPLPPPPEPELNGAPAEDVSMEEDMDICDTPPH 482


>06_02_0175 - 12624608-12625297
          Length = 229

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = -3

Query: 1008 GXXWGXGSFXGXXGXRXQKXXPRGPGGAXXGGXXGVGG*AG 886
            G  WG G+  G  G         G GG   GG  G GG  G
Sbjct: 84   GWGWGWGTDSGGGGSSGGGGGGGGGGGGGGGGGGGGGGGGG 124


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 26.2 bits (55), Expect(2) = 9.6
 Identities = 19/75 (25%), Positives = 23/75 (30%)
 Frame = +1

Query: 640 PXPPPPXXXXPGXRGXXPPFRXXXYXGLPXXXIXTPFXXXLGXQPPHXQXGXEQNXXXFR 819
           P PPPP    P      PP        LP   +  P    +G + P             R
Sbjct: 618 PPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSR 677

Query: 820 GNSGAXXSXXYPXXP 864
             +GA  S   P  P
Sbjct: 678 TPTGAATSSKGPPPP 692



 Score = 20.6 bits (41), Expect(2) = 9.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 637 PPXPPPP 657
           PP PPPP
Sbjct: 587 PPPPPPP 593


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,508,725
Number of Sequences: 37544
Number of extensions: 438609
Number of successful extensions: 2570
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2173
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3608253564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)