Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A10
         (1178 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC084553-1|AAH84553.1|  371|Homo sapiens glutamate receptor, ion...    31   8.1  
BC041788-1|AAH41788.2|  371|Homo sapiens glutamate receptor, ion...    31   8.1  
AB097026-1|BAC77379.1|  371|Homo sapiens putative MAPK activatin...    31   8.1  

>BC084553-1|AAH84553.1|  371|Homo sapiens glutamate receptor,
           ionotropic, N-methyl D-asparate-associated protein 1
           (gluta protein.
          Length = 371

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
 Frame = +1

Query: 637 PPXPPPPXXXXPGXRGXXPPFRXXXYXGLPXXXIXTPFXXXLGXQPPHXQXGXEQNXXXF 816
           PP PP      PG     PPF+   Y         +P+      Q P+ Q G  Q     
Sbjct: 27  PPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYPQGPYPQ 86

Query: 817 RG-NSGAXXSXXYPXXPF 867
            G   G      YP  P+
Sbjct: 87  EGYPQGPYPQGGYPQGPY 104


>BC041788-1|AAH41788.2|  371|Homo sapiens glutamate receptor,
           ionotropic, N-methyl D-asparate-associated protein 1
           (gluta protein.
          Length = 371

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
 Frame = +1

Query: 637 PPXPPPPXXXXPGXRGXXPPFRXXXYXGLPXXXIXTPFXXXLGXQPPHXQXGXEQNXXXF 816
           PP PP      PG     PPF+   Y         +P+      Q P+ Q G  Q     
Sbjct: 27  PPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYPQGPYPQ 86

Query: 817 RG-NSGAXXSXXYPXXPF 867
            G   G      YP  P+
Sbjct: 87  EGYPQGPYPQGGYPQGPY 104


>AB097026-1|BAC77379.1|  371|Homo sapiens putative MAPK activating
           protein protein.
          Length = 371

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
 Frame = +1

Query: 637 PPXPPPPXXXXPGXRGXXPPFRXXXYXGLPXXXIXTPFXXXLGXQPPHXQXGXEQNXXXF 816
           PP PP      PG     PPF+   Y         +P+      Q P+ Q G  Q     
Sbjct: 27  PPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYPQGPYPQ 86

Query: 817 RG-NSGAXXSXXYPXXPF 867
            G   G      YP  P+
Sbjct: 87  EGYPQGPYPQGGYPQGPY 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,173,384
Number of Sequences: 237096
Number of extensions: 2587080
Number of successful extensions: 9203
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7622
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16513869000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)